RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 PIAS3Q9Y6X2 628 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 PTPRDP23468 1912 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 FAM170BA6NMN3 283 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 ARNTLO00327 626 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 CKMP06732 381 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 GPR15P49685 360 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 KPNA1P52294 538 aaPredicted RBP16.41■□□□□ 0.22
UBXN1-217ENST00000534176 NDST1P52848 882 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 CDH8P55286 799 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 LRRC32Q14392 662 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 MAMSTRQ6ZN01 415 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 FAM35AQ86V20 835 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 DDX42Q86XP3 938 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBXN1-217ENST00000534176 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 FAM3CQ92520 227 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
UBXN1-217ENST00000534176 HCRTO43612 131 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 PI15O43692 258 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 YWHAQP27348 245 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 TUBP50607 506 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 SLC8A3P57103 927 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 PAK1Q13153 545 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ANGPT1Q15389 498 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ITPRIPL2Q3MIP1 535 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ZNF528Q3MIS6 628 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 DCAF17Q5H9S7 520 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 SDHAF4Q5VUM1 108 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 TXNDC8Q6A555 127 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 SMYD5Q6GMV2 418 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 SYNPOQ8N3V7 929 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ST13P5Q8NFI4 369 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 USP13Q92995 863 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 HNRNPABQ99729 332 aaKnown RBP16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 DPEP3Q9H4B8 488 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 FBXO4Q9UKT5 387 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 ARHGAP26Q9UNA1 814 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 DENND4CQ5VZ89 1909 aa16.4■□□□□ 0.22
UBXN1-217ENST00000534176 PROB1E7EW31 1015 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 NRG2O14511 850 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-217ENST00000534176 CILPO75339 1184 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 AP1G2O75843 785 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 PRAMEF12O95522 483 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 FAM200BP0CF97 657 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 HDCP19113 662 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 NR1H3Q13133 447 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 CCDC40Q4G0X9 1142 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 DGKKQ5KSL6 1271 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 SNX30Q5VWJ9 437 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 ACOT1Q86TX2 421 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 CCDC26Q8TAB7 109 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 ATP2A3Q93084 1043 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 FAM126AQ9BYI3 521 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-217ENST00000534176 FOXQ1Q9C009 403 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 MMRN2Q9H8L6 949 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 TRPC7Q9HCX4 862 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 IL37Q9NZH6 218 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 MIA3Q5JRA6 1907 aa16.39■□□□□ 0.21
UBXN1-217ENST00000534176 CACNA1HO95180 2353 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 FAM92AA1XBS5 289 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 ZNF840PA6NDX5 716 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 H0Y858 1186 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-217ENST00000534176 LAMTOR5O43504 91 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-217ENST00000534176 TADA3O75528 432 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 DCNP07585 359 aaKnown RBP16.38■□□□□ 0.21
UBXN1-217ENST00000534176 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 NBL1P41271 181 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 RAP1GAPP47736 663 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 MARSP56192 900 aaKnown RBP16.38■□□□□ 0.21
UBXN1-217ENST00000534176 SLC7A9P82251 487 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 TTI2Q6NXR4 508 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 CPA6Q8N4T0 437 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 SLC35C1Q96A29 364 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 CYFIP2Q96F07 1278 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 FAM83CQ9BQN1 747 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 SDCBP2Q9H190 292 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 KIAA1257Q9ULG3 409 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 PIEZO1Q92508 2521 aa16.38■□□□□ 0.21
UBXN1-217ENST00000534176 GREB1Q4ZG55 1949 aa16.37■□□□□ 0.21
UBXN1-217ENST00000534176 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
UBXN1-217ENST00000534176 OLFM2O95897 454 aa16.37■□□□□ 0.21
UBXN1-217ENST00000534176 TARSP26639 723 aaKnown RBP16.37■□□□□ 0.21
UBXN1-217ENST00000534176 PSEN1P49768 467 aa16.37■□□□□ 0.21
UBXN1-217ENST00000534176 CDR1P51861 262 aa16.37■□□□□ 0.21
UBXN1-217ENST00000534176 SLC5A3P53794 718 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms