RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 LAG3P18627 525 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TACR2P21452 398 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FGFR4P22455 802 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KLRC2P26717 231 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 THBS2P35442 1172 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TCF7P36402 384 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 HSD17B4P51659 736 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 BCAR1P56945 870 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 STARD6P59095 220 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 NTHL1P78549 312 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SHC2P98077 582 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MTAPQ13126 283 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 PLCB4Q15147 1175 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SF3A2Q15428 464 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC44A4Q53GD3 710 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 CLLU1OSQ5K130 101 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FAM26FQ5R3K3 315 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TAF2Q6P1X5 1199 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 PARM1Q6UWI2 310 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 METTL7BQ6UX53 244 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 CCDC149Q6ZUS6 474 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC24A5Q71RS6 500 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TRMT1LQ7Z2T5 733 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 RSPH3Q86UC2 560 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MCF2L2Q86YR7 1114 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KIAA0319LQ8IZA0 1049 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 LINC00482Q8N8I6 264 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KBTBD3Q8NAB2 608 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TXNDC5Q8NBS9 432 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 OTUD7AQ8TE49 926 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 PIBF1Q8WXW3 757 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 NELL1Q92832 810 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 GLG1Q92896 1179 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FGF14Q92915 247 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 LPPQ93052 612 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF707Q96C28 371 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 BBC3Q96PG8 261 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KLHL5Q96PQ7 755 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 CDK5RAP1Q96SZ6 601 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SYT3Q9BQG1 590 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MTA3Q9BTC8 594 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MCMBPQ9BTE3 642 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FTHL17Q9BXU8 183 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 BACH2Q9BYV9 841 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 NACAP1Q9BZK3 213 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TANC1Q9C0D5 1861 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SCAND2PQ9GZW5 306 aaPredicted RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TMEM117Q9H0C3 514 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 C2orf42Q9NWW7 574 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 IGSF9Q9P2J2 1179 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FBLN5Q9UBX5 448 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 TUBE1Q9UJT0 475 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 GMEB2Q9UKD1 530 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 FBXO4Q9UKT5 387 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 PPT2Q9UMR5 302 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 LZTS1Q9Y250 596 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 MRPL11Q9Y3B7 192 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 PCDHGA2Q9Y5H1 932 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC12A7Q9Y666 1083 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 NUMBLQ9Y6R0 609 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 LCTP09848 1927 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 ATG2AQ2TAZ0 1938 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 BAZ2AQ9UIF9 1905 aaKnown RBP3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 ABCB11O95342 1321 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 IGSF9BQ9UPX0 1349 aa3.4□□□□□ -1.87
CHMP4A-208ENST00000534106 KANSL1LA0AUZ9 987 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 C7orf72A4D263 438 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 ANHXE9PGG2 379 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 GCOM1H8Y6P7 765 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 ANP32CO43423 234 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CBFA2T2O43439 604 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 ORC4O43929 436 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 TBC1D4O60343 1298 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 RPS6KA5O75582 802 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 FGAP02671 866 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 RETP07949 1114 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 FGRP09769 529 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CT47B1P0C2W7 299 aaPredicted RBP3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 POLR2MP0CAP2 368 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 TDGF1P13385 188 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 LAMP2P13473 410 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 GNAT2P19087 354 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 KLRC1P26715 233 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CCND2P30279 289 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 FNTBP49356 437 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CLCN4P51793 760 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC7A5Q01650 507 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 HTR4Q13639 388 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 NEDD9Q14511 834 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CSRP2Q16527 193 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 PPP2R5EQ16537 467 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 KIZQ2M2Z5 673 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF528Q3MIS6 628 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 HSP90AB4PQ58FF6 505 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 IL31Q6EBC2 164 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF585AQ6P3V2 769 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 KCNV1Q6PIU1 500 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 USP17L6PQ6QN14 398 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 MTHFD1LQ6UB35 978 aa3.39□□□□□ -1.87
CHMP4A-208ENST00000534106 CCDC81Q6ZN84 652 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms