RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 GRM5P41594 1212 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 RARRES1P49788 294 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 RCAN1P53805 252 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 NLRP12P59046 1061 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 NLRP5P59047 1200 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 OSTNP61366 133 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 CCDC173Q0VFZ6 552 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 MYO1EQ12965 1108 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 NR1H3Q13133 447 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 MYBPC2Q14324 1141 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 MGAT5BQ3V5L5 792 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 SYCP2LQ5T4T6 812 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 ATF7IP2Q5U623 682 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 TXNDC8Q6A555 127 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 ALKAL1Q6UXT8 129 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 APBB1IPQ7Z5R6 666 aaPredicted RBP7.01□□□□□ -1.29
CD44-237ENST00000534082 USP37Q86T82 979 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 TMEM150AQ86TG1 271 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 MON1AQ86VX9 555 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 TMPRSS12Q86WS5 348 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 TPH2Q8IWU9 490 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 SPACA3Q8IXA5 215 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 SMC5Q8IY18 1101 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 RHBDD1Q8TEB9 315 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 BSNDQ8WZ55 320 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 MRPS31Q92665 395 aaKnown RBP7.01□□□□□ -1.29
CD44-237ENST00000534082 TCEANC2Q96MN5 208 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
CD44-237ENST00000534082 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 GAREM1Q9H706 876 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 ANKEF1Q9NU02 776 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 HSFX1Q9UBD0 423 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 IL17BQ9UHF5 180 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 NAP1L2Q9ULW6 460 aaPredicted RBP7.01□□□□□ -1.29
CD44-237ENST00000534082 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD44-237ENST00000534082 AK5Q9Y6K8 562 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 FLNCQ14315 2725 aa7.01□□□□□ -1.29
CD44-237ENST00000534082 CCDC196A0A1B0GTZ2 297 aa7□□□□□ -1.29
CD44-237ENST00000534082 PRPF3O43395 683 aaKnown RBP7□□□□□ -1.29
CD44-237ENST00000534082 TNFSF14O43557 240 aa7□□□□□ -1.29
CD44-237ENST00000534082 KRT38O76015 456 aa7□□□□□ -1.29
CD44-237ENST00000534082 SLITRK3O94933 977 aa7□□□□□ -1.29
CD44-237ENST00000534082 LYPLA2O95372 231 aa7□□□□□ -1.29
CD44-237ENST00000534082 F11P03951 625 aa7□□□□□ -1.29
CD44-237ENST00000534082 CKMP06732 381 aa7□□□□□ -1.29
CD44-237ENST00000534082 GABRG2P18507 467 aa7□□□□□ -1.29
CD44-237ENST00000534082 HSPA4P34932 840 aa7□□□□□ -1.29
CD44-237ENST00000534082 HNF1BP35680 557 aa7□□□□□ -1.29
CD44-237ENST00000534082 MATKP42679 507 aa7□□□□□ -1.29
CD44-237ENST00000534082 KIR2DL1P43626 348 aaPredicted RBP7□□□□□ -1.29
CD44-237ENST00000534082 TUFMP49411 452 aaKnown RBP7□□□□□ -1.29
CD44-237ENST00000534082 CDR1P51861 262 aa7□□□□□ -1.29
CD44-237ENST00000534082 CLDN6P56747 220 aa7□□□□□ -1.29
CD44-237ENST00000534082 AKAP17AQ02040 695 aaKnown RBP7□□□□□ -1.29
CD44-237ENST00000534082 NUCB1Q02818 461 aa7□□□□□ -1.29
CD44-237ENST00000534082 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
CD44-237ENST00000534082 MESP2Q0VG99 397 aa7□□□□□ -1.29
CD44-237ENST00000534082 GAB4Q2WGN9 574 aa7□□□□□ -1.29
CD44-237ENST00000534082 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
CD44-237ENST00000534082 NT5DC1Q5TFE4 455 aa7□□□□□ -1.29
CD44-237ENST00000534082 ZCCHC9Q8N567 271 aaKnown RBP7□□□□□ -1.29
CD44-237ENST00000534082 MCPH1Q8NEM0 835 aa7□□□□□ -1.29
CD44-237ENST00000534082 DEPTORQ8TB45 409 aa7□□□□□ -1.29
CD44-237ENST00000534082 TMEM176AQ96HP8 235 aa7□□□□□ -1.29
CD44-237ENST00000534082 YTHDC1Q96MU7 727 aaKnown RBP7□□□□□ -1.29
CD44-237ENST00000534082 ACAP3Q96P50 834 aa7□□□□□ -1.29
CD44-237ENST00000534082 KIFC3Q9BVG8 833 aa7□□□□□ -1.29
CD44-237ENST00000534082 CDT1Q9H211 546 aa7□□□□□ -1.29
CD44-237ENST00000534082 KCNK4Q9NYG8 393 aa7□□□□□ -1.29
CD44-237ENST00000534082 CNTN3Q9P232 1028 aa7□□□□□ -1.29
CD44-237ENST00000534082 ANKMY1Q9P2S6 941 aa7□□□□□ -1.29
CD44-237ENST00000534082 TUBGCP4Q9UGJ1 667 aa7□□□□□ -1.29
CD44-237ENST00000534082 PCDHA4Q9UN74 947 aa7□□□□□ -1.29
CD44-237ENST00000534082 CYP8B1Q9UNU6 501 aa7□□□□□ -1.29
CD44-237ENST00000534082 PCDHGB2Q9Y5G2 931 aa7□□□□□ -1.29
CD44-237ENST00000534082 TRIP11Q15643 1979 aa7□□□□□ -1.29
CD44-237ENST00000534082 ABCA12Q86UK0 2595 aa7□□□□□ -1.29
CD44-237ENST00000534082 CEP192Q8TEP8 1941 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 A0A1B0GTW7 788 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TERTO14746 1132 aaKnown RBP6.99□□□□□ -1.29
CD44-237ENST00000534082 ZNF217O75362 1048 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TADA3O75528 432 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 KAT7O95251 611 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 GP1BBP13224 206 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 KRT10P13645 584 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TIMP2P16035 220 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 HMGA1P17096 107 aaKnown RBP6.99□□□□□ -1.29
CD44-237ENST00000534082 MAOBP27338 520 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 ADSSP30520 456 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 NAMPTP43490 491 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TMPRSS3P57727 454 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 DMP1Q13316 513 aaPredicted RBP6.99□□□□□ -1.29
CD44-237ENST00000534082 RTP5Q14D33 572 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 INF2Q27J81 1249 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 SLC39A12Q504Y0 691 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 WDR45BQ5MNZ6 344 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TTC22Q5TAA0 569 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms