RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TPBGLP0DKB5 382 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TROVE2P10155 538 aaKnown RBP eCLIP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TGFB2P61812 414 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 YWHAGP61981 247 aaKnown RBP eCLIP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 GHRHRQ02643 423 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 MMRN1Q13201 1228 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 CUL3Q13618 768 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TMEM132AQ24JP5 1023 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 PTPN20Q4JDL3 420 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 EFHC2Q5JST6 749 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 FAXCQ5TGI0 409 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 SLFN12LQ6IEE8 588 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 DSTYKQ6XUX3 929 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TTC7BQ86TV6 843 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TRIM42Q8IWZ5 723 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 MIPEPQ99797 713 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 MAF1Q9H063 256 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 CYP39A1Q9NYL5 469 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 SERPINB3P29508 390 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 PSMC1P62191 440 aaKnown RBP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 CAPSQ13938 189 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 TMEM132BQ14DG7 1078 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 RAB6CQ53S08 254 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 PPIL6Q8IXY8 311 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 KCTD6Q8NC69 237 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 SLC35B2Q8TB61 432 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 DTX3LQ8TDB6 740 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 NKD2Q969F2 451 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 RAB6CQ9H0N0 254 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 MANSC1Q9H8J5 431 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 SENP1Q9P0U3 644 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 ARMCX1Q9P291 453 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 CYTH4Q9UIA0 394 aa20.23■□□□□ 0.83
CAPN1-226ENST00000533820 DRG1Q9Y295 367 aaKnown RBP20.23■□□□□ 0.83
CAPN1-226ENST00000533820 LRCH4O75427 683 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 ASS1P00966 412 aaKnown RBP20.22■□□□□ 0.83
CAPN1-226ENST00000533820 MT-ND3P03897 115 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 MCL1Q07820 350 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 CTAGE3PQ8IX95 158 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 LRRC71Q8N4P6 559 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 TEPSINQ96N21 525 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 UBE2OQ9C0C9 1292 aaKnown RBP20.22■□□□□ 0.83
CAPN1-226ENST00000533820 SLC24A2Q9UI40 661 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 H0YCG3 227 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 TPD52L2O43399 206 aaKnown RBP20.22■□□□□ 0.83
CAPN1-226ENST00000533820 GJB1P08034 283 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 BGNP21810 368 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 PHBP35232 272 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 ELK3P41970 407 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 PIGHQ14442 188 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-226ENST00000533820 PARP6Q2NL67 630 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 KHDC1Q4VXA5 237 aaKnown RBP20.22■□□□□ 0.83
CAPN1-226ENST00000533820 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 GALNT15Q8N3T1 639 aa20.22■□□□□ 0.83
CAPN1-226ENST00000533820 LPXNO60711 386 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 ATP5HO75947 161 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 PTDSS1P48651 473 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 RTP1P59025 263 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 EIF3EP60228 445 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 SH3PXD2AQ5TCZ1 1133 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 PDIK1LQ8N165 341 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 PRPF31Q8WWY3 499 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 CFAP36Q96G28 342 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 SERAC1Q96JX3 654 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 PHACTR1Q9C0D0 580 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 FARP1Q9Y4F1 1045 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 IKBKGQ9Y6K9 419 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 YY1P25490 414 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 NAMPTP43490 491 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 FKBP1CQ5VVH2 108 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 DRICH1Q6PGQ1 229 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 RBM12BQ8IXT5 1001 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 TSSK1BQ9BXA7 367 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 DNAAF2Q9NVR5 837 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 MAP3K20Q9NYL2 800 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 STYXL1Q9Y6J8 313 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 TCRBV5S1A1TA0A578 114 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 GRAP2O75791 330 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 ZWINTO95229 277 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
CAPN1-226ENST00000533820 RBP3P10745 1247 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 FAAP100Q0VG06 881 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 CCDC6Q16204 474 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 CDO1Q16878 200 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 ZNF699Q32M78 642 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 KBTBD12Q3ZCT8 623 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 SNCAIPQ9Y6H5 919 aa20.21■□□□□ 0.83
CAPN1-226ENST00000533820 CCDC195A0A1B0GUA6 201 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 C3orf70A6NLC5 250 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 CSDE1O75534 798 aaKnown RBP20.2■□□□□ 0.82
CAPN1-226ENST00000533820 GNAZP19086 355 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 RASSF2P50749 326 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 ZNF132P52740 706 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 PTK7Q13308 1070 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 CCDC33Q8N5R6 958 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 SPATA18Q8TC71 538 aa20.2■□□□□ 0.82
CAPN1-226ENST00000533820 CADM1Q9BY67 442 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms