RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CYP26C1Q6V0L0 522 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 CCDC149Q6ZUS6 474 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 DEFB123Q8N688 67 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 EFHBQ8N7U6 833 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 SLC7A14Q8TBB6 771 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 GPR152Q8TDT2 470 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 STK32AQ8WU08 396 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 GUCD1Q96NT3 240 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 GAS2L1Q99501 681 aaPredicted RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 BAG1Q99933 345 aaPredicted RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 UBXN6Q9BZV1 441 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
COMMD9-208ENST00000533643 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 YIPF1Q9Y548 306 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 INSL5Q9Y5Q6 135 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
COMMD9-208ENST00000533643 FAM170AA1A519 330 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 TRIM66O15016 1216 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 LINC01565O15544 149 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 GLP2RO95838 553 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 C8AP07357 584 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 UNGP13051 313 aaPredicted RBP12.58□□□□□ -0.4
COMMD9-208ENST00000533643 ATF6P18850 670 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 ANXA13P27216 316 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 PLA2G4AP47712 749 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 ALDH1A3P47895 512 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 RGS7P49802 495 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 TWF1Q12792 350 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 ADAM15Q13444 863 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 LIN9Q5TKA1 542 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 TMEM184AQ6ZMB5 413 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 GPRIN1Q7Z2K8 1008 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 PIGZQ86VD9 579 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 LRRC8AQ8IWT6 810 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
COMMD9-208ENST00000533643 SLC4A5Q9BY07 1137 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 TAS2R14Q9NYV8 317 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 NENFQ9UMX5 172 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
COMMD9-208ENST00000533643 SZT2Q5T011 3432 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 SOWAHDA6NJG2 315 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 AKR1B10O60218 316 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 RFPL2O75678 378 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 ZMYND10O75800 440 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PTMAP06454 111 aaKnown RBP12.57□□□□□ -0.4
COMMD9-208ENST00000533643 GZMAP12544 262 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 RPL34P49207 117 aaKnown RBP12.57□□□□□ -0.4
COMMD9-208ENST00000533643 KIF11P52732 1056 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 EPHB3P54753 998 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PDCLQ13371 301 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 RAB41Q5JT25 222 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 ACAD10Q6JQN1 1059 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC170Q8IYT3 715 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 STKLD1Q8NE28 680 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 KCTD13Q8WZ19 329 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 CASP10Q92851 521 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 HSFY1Q96LI6 401 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 CEP295NLQ96MC4 621 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 CPXM1Q96SM3 734 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 DEF6Q9H4E7 631 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PNPLA8Q9NP80 782 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PRRC2BQ5JSZ5 2229 aaKnown RBP12.57□□□□□ -0.4
COMMD9-208ENST00000533643 PTPRDP23468 1912 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 SLC38A8A6NNN8 435 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 TMCO5BA8MYB1 307 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 PIK3R2O00459 728 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ZNF263O14978 683 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CCL16O15467 120 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 RTN2O75298 545 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 LRG1P02750 347 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 FTLP02792 175 aaPredicted RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 MMP8P22894 467 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 GABRB2P47870 512 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 USP46P62068 366 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CCZ1BP86790 482 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CCZ1P86791 482 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms