RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 A0A1W2PQ64 194 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 A0A1W2PQD8 194 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 GRID2IPA4D2P6 1211 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 USP17L10C9JJH3 530 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MTRF1O75570 445 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TAC1P20366 129 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ADORA2BP29275 332 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 HOXD12P35452 270 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MCAMP43121 646 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SPP2Q13103 211 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CNPY1Q3B7I2 92 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PHC2Q8IXK0 858 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 GRPEL2Q8TAA5 225 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 KCNB2Q92953 911 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 DGCR14Q96DF8 476 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 NSMCE3Q96MG7 304 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ZBTB18Q99592 522 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ANKZF1Q9H8Y5 726 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RNF146Q9NTX7 359 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 EFR3BQ9Y2G0 817 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RPS6KL1Q9Y6S9 549 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 NWD1Q149M9 1564 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 KBTBD13C9JR72 458 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 E5RI56 91 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 O00370 1275 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SH2B2O14492 632 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 VDRP11473 427 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ALCAMQ13740 583 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SPIDRQ14159 915 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 VEPH1Q14D04 833 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 LVRNQ6Q4G3 990 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ACAD11Q709F0 780 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MICALL2Q8IY33 904 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC25A41Q8N5S1 370 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RMND5BQ96G75 393 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 AGBL1Q96MI9 1066 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 EMILIN2Q9BXX0 1053 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SP110Q9HB58 689 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 FBXO28Q9NVF7 368 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ETNK2Q9NVF9 386 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ZSWIM5Q9P217 1185 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 DMTF1Q9Y222 760 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 AK5Q9Y6K8 562 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SLIT3O75094 1523 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MROH7-TTC4A0A0A0MT08 1334 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SRRM3A6NNA2 597 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PODXLO00592 558 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CLASP2O75122 1294 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CYP2D6P10635 497 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PTPN4P29074 926 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RPL5P46777 297 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PTPN5P54829 565 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 NCKAP1LP55160 1127 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 KCNJ2P63252 427 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 DMC1Q14565 340 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TAF5Q15542 800 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TTC23LQ6PF05 361 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TMA16Q96EY4 203 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MS4A14Q96JA4 679 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM84BQ96KN1 310 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM213AQ9BRX8 229 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SPON2Q9BUD6 331 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RGS17Q9UGC6 210 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CLCA2Q9UQC9 943 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF142P52746 1687 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 KNDC1Q76NI1 1749 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PRPF4O43172 522 aaKnown RBP eCLIP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PHGDHO43175 533 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ENO3P13929 434 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 AARSP49588 968 aaKnown RBP eCLIP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PRELPP51888 382 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TPTEP56180 551 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CUL4AQ13619 759 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM117BQ6P1L5 589 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 DNAJC1Q96KC8 554 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 DNAJC7Q99615 494 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM96AQ9H5X1 160 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 WDR6Q9NNW5 1121 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 RPH3AQ9Y2J0 694 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 HEY1Q9Y5J3 304 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 PRR23AA6NEV1 266 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC16A4O15374 487 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 CSE1LP55060 971 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 VBP1P61758 197 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 POU5F1Q01860 360 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 INPP5AQ14642 412 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 MORF4L2Q15014 288 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC39A14Q15043 492 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 SWSAP1Q6NVH7 229 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 WDR93Q6P2C0 686 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 PTF1AQ7RTS3 328 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 LRRC6Q86X45 466 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 ELMOD2Q8IZ81 293 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 NSUN6Q8TEA1 469 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 GPATCH1Q9BRR8 931 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 SPRTNQ9H040 489 aaPredicted RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 TMBIM4Q9HC24 238 aa7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 GPBP1L1Q9HC44 474 aaPredicted RBP7.21□□□□□ -1.25
TGFBR3-210ENST00000533089 M0QYV0 167 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms