RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 SPEM1Q8N4L4 309 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 HINFPQ9BQA5 517 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 VRTNQ9H8Y1 702 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 OBSL1O75147 1896 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 DENND4CQ5VZ89 1909 aa24.53■■□□□ 1.52
LTBP3-220ENST00000532661 GPR179Q6PRD1 2367 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 TRIM66O15016 1216 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 MTF1Q14872 753 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 ZNF77Q15935 545 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 ZNF667Q5HYK9 610 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 C1orf220Q5T0J3 134 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 B3GALNT2Q8NCR0 500 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 RUBCNQ92622 972 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 C8orf48Q96LL4 319 aa24.52■■□□□ 1.52
LTBP3-220ENST00000532661 CALUO43852 315 aaPredicted RBP24.51■■□□□ 1.51
LTBP3-220ENST00000532661 ZNF202O95125 648 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 HDCP19113 662 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 DMWDQ09019 674 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 ZACNQ401N2 412 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 KIAA2013Q8IYS2 634 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 TMC2Q8TDI7 906 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 SH3RF2Q8TEC5 729 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 CEP295NLQ96MC4 621 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 TTLL2Q9BWV7 592 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 FAM126AQ9BYI3 521 aaPredicted RBP24.51■■□□□ 1.51
LTBP3-220ENST00000532661 TRPM5Q9NZQ8 1165 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 TRAF3IP3Q9Y228 551 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 WNT6Q9Y6F9 365 aa24.51■■□□□ 1.51
LTBP3-220ENST00000532661 KIF26AQ9ULI4 1882 aaPredicted RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 NOP14P78316 857 aaKnown RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 ZXDBP98169 803 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 USP4Q13107 963 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 KCNB1Q14721 858 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 PDGFRLQ15198 375 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 NAIF1Q69YI7 327 aaPredicted RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 SV2AQ7L0J3 742 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 CCDC47Q96A33 483 aaKnown RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 ELOVL4Q9GZR5 314 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 EPC1Q9H2F5 836 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 FBRSL1Q9HCM7 1045 aaKnown RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 DUS2Q9NX74 493 aaKnown RBP24.5■■□□□ 1.51
LTBP3-220ENST00000532661 FRMD4BQ9Y2L6 1034 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 SPTBN4Q9H254 2564 aa24.5■■□□□ 1.51
LTBP3-220ENST00000532661 OTOGLQ3ZCN5 2332 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 IFRD2Q12894 506 aaPredicted RBP24.49■■□□□ 1.51
LTBP3-220ENST00000532661 PPP2R5DQ14738 602 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 SPOPLQ6IQ16 392 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 FSTL4Q6MZW2 842 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 PKN3Q6P5Z2 889 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 PAQR9Q6ZVX9 377 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 OSCP1Q8WVF1 389 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 LINC00597Q9H2U6 94 aa24.49■■□□□ 1.51
LTBP3-220ENST00000532661 SMG5Q9UPR3 1016 aaKnown RBP24.49■■□□□ 1.51
LTBP3-220ENST00000532661 ZNF840PA6NDX5 716 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 K7ESF4 209 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 AKAP3O75969 853 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 NR2F2P24468 414 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 VAMP7P51809 220 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 NRLP54845 237 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 TAF10Q12962 218 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 ORC1Q13415 861 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 SGSM1Q2NKQ1 1148 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 TMEM196Q5HYL7 178 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 KCNK16Q96T55 309 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 RNF38Q9H0F5 515 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 ECT2Q9H8V3 914 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 ARHGAP26Q9UNA1 814 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 DMXL1Q9Y485 3027 aa24.48■■□□□ 1.51
LTBP3-220ENST00000532661 PTPRDP23468 1912 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 CHURC1-FNTBB4DL54 471 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 TRDMT1O14717 391 aaKnown RBP24.47■■□□□ 1.51
LTBP3-220ENST00000532661 KIF20AO95235 890 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 ABL1P00519 1130 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 HLA-DRAP01903 254 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 GJA4P35212 333 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 IFNAR2P48551 515 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 FNTBP49356 437 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 GALK1P51570 392 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 EML3Q32P44 896 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 ACOT1Q86TX2 421 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 FAM35AQ86V20 835 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 SYNPOQ8N3V7 929 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 GUF1Q8N442 669 aaKnown RBP24.47■■□□□ 1.51
LTBP3-220ENST00000532661 MED10Q9BTT4 135 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 EHD2Q9NZN4 543 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 NCDNQ9UBB6 729 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 HMGXB4Q9UGU5 601 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 GREB1Q4ZG55 1949 aa24.47■■□□□ 1.51
LTBP3-220ENST00000532661 ZNF638Q14966 1978 aaKnown RBP24.46■■□□□ 1.51
LTBP3-220ENST00000532661 IKBKBO14920 756 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 EGFP01133 1207 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 TRIM49P0CI25 452 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 TRIM49CP0CI26 452 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 GRSF1Q12849 480 aaKnown RBP eCLIP24.46■■□□□ 1.51
LTBP3-220ENST00000532661 LPAL2Q16609 132 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 NFIL3Q16649 462 aa24.46■■□□□ 1.51
LTBP3-220ENST00000532661 HEATR6Q6AI08 1181 aaKnown RBP24.46■■□□□ 1.51
LTBP3-220ENST00000532661 SMYD4Q8IYR2 804 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms