RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 BECN1Q14457 450 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 ZNF77Q15935 545 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 SGSM1Q2NKQ1 1148 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 ZNF667Q5HYK9 610 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 CEP135Q66GS9 1140 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 TRIM68Q6AZZ1 485 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 PAQR9Q6ZVX9 377 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 SUMF1Q8NBK3 374 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 PCDHGA2Q9Y5H1 932 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 OTOGLQ3ZCN5 2332 aa16.84■□□□□ 0.29
LDLRAD3-205ENST00000532490 ZNF292O60281 2723 aa16.83■□□□□ 0.29
LDLRAD3-205ENST00000532490 FRYLO94915 3013 aa16.83■□□□□ 0.29
LDLRAD3-205ENST00000532490 TRAV19A0A0A6YYK7 116 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 CLDN5O00501 218 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 USP17L7P0C7H9 530 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 TCF3P15923 654 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 ANXA13P27216 316 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 VAMP7P51809 220 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 USP4Q13107 963 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 CCINQ13939 588 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 PON2Q15165 354 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 TAF4BQ92750 862 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 ELOVL4Q9GZR5 314 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 EBF3Q9H4W6 596 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 TRPC7Q9HCX4 862 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 ZSCAN32Q9NX65 697 aa16.83■□□□□ 0.28
LDLRAD3-205ENST00000532490 GPR179Q6PRD1 2367 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 ZNF840PA6NDX5 716 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 HLA-DRAP01903 254 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 ARSAP15289 507 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 PFKLP17858 780 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 HDCP19113 662 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 NUCB2P80303 420 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 ZXDBP98169 803 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 ENPEPQ07075 957 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 PPP3CAQ08209 521 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 PNOCQ13519 176 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 LRRC32Q14392 662 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 MTF1Q14872 753 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 SCARA5Q6ZMJ2 495 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 SPEM1Q8N4L4 309 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 FAM126AQ9BYI3 521 aaPredicted RBP16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 ARHGAP26Q9UNA1 814 aa16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
LDLRAD3-205ENST00000532490 KINO60870 393 aaKnown RBP16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 OLFM2O95897 454 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 CKMP06732 381 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 ASPAP45381 313 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 PPP3CCP48454 512 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 CCR3P51677 355 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 SATB1Q01826 763 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 ADAM9Q13443 819 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 PDGFRLQ15198 375 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 EDRF1Q3B7T1 1238 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 SPOPLQ6IQ16 392 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 Q6ZS52 159 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 INTS8Q75QN2 995 aaKnown RBP16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 FUKQ8N0W3 1084 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 CRYBG2Q8N1P7 616 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 OSCP1Q8WVF1 389 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 KCNK16Q96T55 309 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 RNF38Q9H0F5 515 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 C2orf42Q9NWW7 574 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 IL37Q9NZH6 218 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 EHD2Q9NZN4 543 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 TRPM5Q9NZQ8 1165 aa16.81■□□□□ 0.28
LDLRAD3-205ENST00000532490 TRDMT1O14717 391 aaKnown RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TNFRSF10BO14763 440 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 PAPSS2O95340 614 aaPredicted RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TRIM49P0CI25 452 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TRIM49CP0CI26 452 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 PSMC2P35998 433 aaKnown RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 CXCL12P48061 93 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 GCLMP48507 274 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TAF10Q12962 218 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TMEM196Q5HYL7 178 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 CC2D1AQ6P1N0 951 aaPredicted RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 ACOT1Q86TX2 421 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 FAM35AQ86V20 835 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 FAM186BQ8IYM0 893 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 SYNPOQ8N3V7 929 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TAS1R2Q8TE23 839 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 SH3RF2Q8TEC5 729 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 ATRIPQ8WXE1 791 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 HMGXB4Q9UGU5 601 aa16.8■□□□□ 0.28
LDLRAD3-205ENST00000532490 SPTBN4Q9H254 2564 aa16.79■□□□□ 0.28
LDLRAD3-205ENST00000532490 K7ESF4 209 aa16.79■□□□□ 0.28
LDLRAD3-205ENST00000532490 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
LDLRAD3-205ENST00000532490 P4HA1P13674 534 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms