RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DDX1Q92499 740 aaKnown RBP19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 SPATA17Q96L03 361 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 MMS19Q96T76 1030 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 INVSQ9Y283 1065 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 CHD6Q8TD26 2715 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 PI4KAP42356 2102 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 TM4SF5O14894 197 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 KIAA0391O15091 583 aaKnown RBP19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 WARSP23381 471 aaKnown RBP19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 OPRD1P41143 372 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 MDH1BQ5I0G3 518 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 N4BP2L1Q5TBK1 243 aaPredicted RBP19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 VSTM1Q6UX27 236 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 DENND5BQ6ZUT9 1274 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 RDH13Q8NBN7 331 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 ACDQ96AP0 544 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 PCED1BQ96HM7 432 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 MRPL45Q9BRJ2 306 aaKnown RBP19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 PCDHGA5Q9Y5G8 931 aa19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 MORC2Q9Y6X9 1032 aaPredicted RBP19.68■□□□□ 0.74
SSSCA1-206ENST00000531405 PLXND1Q9Y4D7 1925 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 LEFTY2O00292 366 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 SCAMP3O14828 347 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 NFATC1O95644 943 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 CST3P01034 146 aaPredicted RBP19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 DLATP10515 647 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TCF3P15923 654 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 ANXA13P27216 316 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 DGKEP52429 567 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 NR1H3Q13133 447 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 SURF1Q15526 300 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 MAPRE1Q15691 268 aaKnown RBP19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 E2F4Q16254 413 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 ST3GAL2Q16842 350 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 GAB4Q2WGN9 574 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 C2orf27AQ580R0 203 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 STXBP4Q6ZWJ1 553 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TRAPPC11Q7Z392 1133 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 WDR49Q8IV35 697 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 CHAMP1Q96JM3 812 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TPSD1Q9BZJ3 242 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 RNF38Q9H0F5 515 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TNMDQ9H2S6 317 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 VPS45Q9NRW7 570 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TMEM30AQ9NV96 361 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 TRPM5Q9NZQ8 1165 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 EBF1Q9UH73 591 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 GON4LQ3T8J9 2241 aa19.67■□□□□ 0.74
SSSCA1-206ENST00000531405 F8VP50 259 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 K7EQS6 105 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 ABL1P00519 1130 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 NASPP49321 788 aaPredicted RBP19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 CACNA2D1P54289 1103 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 CREB5Q02930 508 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 STK38Q15208 465 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 ELF2Q15723 593 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 SNRNP35Q16560 246 aaKnown RBP19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 HS2ST1Q7LGA3 356 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 FILIP1Q7Z7B0 1213 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 SFTPA1Q8IWL2 248 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 TSTD1Q8NFU3 115 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 USP33Q8TEY7 942 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 TTLL2Q9BWV7 592 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 TRIM9Q9C026 710 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 SNX25Q9H3E2 840 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 DPEP3Q9H4B8 488 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 KBTBD4Q9NVX7 518 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 SMPD4Q9NXE4 827 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 ADAMTS9Q9P2N4 1935 aa19.66■□□□□ 0.74
SSSCA1-206ENST00000531405 ZNF840PA6NDX5 716 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 TRIM66O15016 1216 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 TGFB1I1O43294 461 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 RHOBTB1O94844 696 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CYP17A1P05093 508 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 TNNI1P19237 187 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 GBP1P32455 592 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 GNL1P36915 607 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 PDE6CP51160 858 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CYP2J2P51589 502 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 ASIC1P78348 528 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 IFRD2Q12894 506 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 RNF43Q68DV7 783 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 EPM2AIP1Q7L775 607 aaPredicted RBP19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CCDC33Q8N5R6 958 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 LINC00301Q8NCQ3 95 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 OR6B3Q8NGW1 331 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CCDC127Q96BQ5 260 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 DHX58Q96C10 678 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 AGPAT3Q9NRZ7 376 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CPQQ9Y646 472 aa19.65■□□□□ 0.74
SSSCA1-206ENST00000531405 CLIC2O15247 247 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 EIF3DO15371 548 aaKnown RBP eCLIP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 NOP14P78316 857 aaKnown RBP19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 MESP2Q0VG99 397 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 ANO7Q6IWH7 933 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 NELFCDQ8IXH7 590 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 ZNF507Q8TCN5 953 aa19.64■□□□□ 0.73
SSSCA1-206ENST00000531405 CEP295NLQ96MC4 621 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms