RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 VRTNQ9H8Y1 702 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 DUS2Q9NX74 493 aaKnown RBP13.67□□□□□ -0.22
RPS3-216ENST00000530721 TRPM5Q9NZQ8 1165 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
RPS3-216ENST00000530721 NME7Q9Y5B8 376 aa13.67□□□□□ -0.22
RPS3-216ENST00000530721 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
RPS3-216ENST00000530721 A8MXQ7 604 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 F8VP50 259 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 PDXKO00764 312 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 TCF3P15923 654 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 HDCP19113 662 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 HOXA6P31267 233 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 CNR2P34972 360 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 PPP3CCP48454 512 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 IFNAR2P48551 515 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 FNTBP49356 437 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 USP46P62068 366 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
RPS3-216ENST00000530721 CLDN10P78369 228 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 ZNF699Q32M78 642 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
RPS3-216ENST00000530721 LAIR1Q6GTX8 287 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 FSTL4Q6MZW2 842 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 B3GALNT2Q8NCR0 500 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 PLEKHO2Q8TD55 490 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 SH3RF2Q8TEC5 729 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 ATP2A3Q93084 1043 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 ELOVL4Q9GZR5 314 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 KCTD10Q9H3F6 313 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 DPEP3Q9H4B8 488 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 ECT2Q9H8V3 914 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 C2orf42Q9NWW7 574 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 HPSEQ9Y251 543 aa13.66□□□□□ -0.22
RPS3-216ENST00000530721 DNAH14Q0VDD8 3507 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 ATG13O75143 517 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 CLSTN1O94985 981 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
RPS3-216ENST00000530721 DRD1P21728 446 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 GJA4P35212 333 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 DMWDQ09019 674 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 NCOA4Q13772 614 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 SIM2Q14190 667 aaPredicted RBP13.65□□□□□ -0.22
RPS3-216ENST00000530721 PUM1Q14671 1186 aaKnown RBP eCLIP13.65□□□□□ -0.225e-8■□□□□ 10.5
RPS3-216ENST00000530721 ZNF667Q5HYK9 610 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 PRR23BQ6ZRT6 265 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 ZNF518BQ9C0D4 1074 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 ZDHHC9Q9Y397 364 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 WNT6Q9Y6F9 365 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 CACNA1AO00555 2505 aa13.65□□□□□ -0.22
RPS3-216ENST00000530721 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 HRO43593 1189 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 KIF20AO95235 890 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 EGFP01133 1207 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 NR3C1P04150 777 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
RPS3-216ENST00000530721 SYKP43405 635 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 GALK1P51570 392 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 CACNA2D1P54289 1103 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 NR1H3Q13133 447 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 LPAL2Q16609 132 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 EML3Q32P44 896 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 FBXO43Q4G163 708 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 HEATR6Q6AI08 1181 aaKnown RBP13.64□□□□□ -0.23
RPS3-216ENST00000530721 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 WDR5BQ86VZ2 330 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 SLITRK1Q96PX8 696 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 B3GNT5Q9BYG0 378 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 SMYD3Q9H7B4 428 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 DLL3Q9NYJ7 618 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 ATP6V1DQ9Y5K8 247 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
RPS3-216ENST00000530721 ATP8B3O60423 1300 aa13.64□□□□□ -0.23
RPS3-216ENST00000530721 FAM237AA0A1B0GTK4 181 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 CLDN5O00501 218 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
RPS3-216ENST00000530721 RNF40O75150 1001 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 VNN1O95497 513 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 NFATC1O95644 943 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 OLFM2O95897 454 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 RETP07949 1114 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 P4HA1P13674 534 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 SDHBP21912 280 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 TGM1P22735 817 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 NDUFA8P51970 172 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 CDH8P55286 799 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 DLG4P78352 724 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 SLC7A9P82251 487 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 LMNB2Q03252 620 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 TAF10Q12962 218 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 RSPO4Q2I0M5 234 aaPredicted RBP13.63□□□□□ -0.23
RPS3-216ENST00000530721 SGSM1Q2NKQ1 1148 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 ZACNQ401N2 412 aa13.63□□□□□ -0.23
RPS3-216ENST00000530721 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms