RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 CORO1BQ9BR76 489 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 ITIH6Q6UXX5 1313 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 TNFRSF10BO14763 440 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 MICAL2O94851 1124 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 TPM3P06753 285 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 CFHP08603 1231 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 PTPN2P17706 415 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SSTR3P32745 418 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-220ENST00000530567 CCR2P41597 374 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 USP46P62068 366 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 STILQ15468 1287 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 SLC5A9Q2M3M2 681 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 ITIH5Q86UX2 942 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 GPIHBP1Q8IV16 184 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 ATXN2LQ8WWM7 1075 aaKnown RBP22.57■■□□□ 1.2
CAPN1-220ENST00000530567 NECTIN4Q96NY8 510 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 IL21Q9HBE4 155 aa22.57■■□□□ 1.2
CAPN1-220ENST00000530567 AVENQ9NQS1 362 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-220ENST00000530567 TULP2O00295 520 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 THAP12O43422 761 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 GFPT2O94808 682 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 CSH1P0DML2 217 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 CSH2P0DML3 217 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 IL9P15248 144 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 ANXA13P27216 316 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 STAT1P42224 750 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 BCAT1P54687 386 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PLCB2Q00722 1185 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PTK2Q05397 1052 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PUS10Q3MIT2 529 aaKnown RBP22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PABPC1LQ4VXU2 614 aaKnown RBP22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PRSS36Q5K4E3 855 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 GPRIN1Q7Z2K8 1008 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 CACNA2D4Q7Z3S7 1137 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 UBA3Q8TBC4 463 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 MYRFLQ96LU7 910 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 PNPLA8Q9NP80 782 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 ASAH2Q9NR71 780 aa22.56■■□□□ 1.2
CAPN1-220ENST00000530567 UNC80Q8N2C7 3258 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 ZNF638Q14966 1978 aaKnown RBP22.55■■□□□ 1.2
CAPN1-220ENST00000530567 MOSPD3O75425 235 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 CYP11B1P15538 503 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 SLC5A3P53794 718 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 MRPS5P82675 430 aaKnown RBP22.55■■□□□ 1.2
CAPN1-220ENST00000530567 PDE4CQ08493 712 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 BST2Q10589 180 aaKnown RBP22.55■■□□□ 1.2
CAPN1-220ENST00000530567 AAK1Q2M2I8 961 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 DENND1BQ6P3S1 775 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 DENND5BQ6ZUT9 1274 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 VSTM4Q8IW00 320 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 EPS8L1Q8TE68 723 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 DDX1Q92499 740 aaKnown RBP22.55■■□□□ 1.2
CAPN1-220ENST00000530567 TCEAL4Q96EI5 215 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 TRMT2BQ96GJ1 504 aaKnown RBP22.55■■□□□ 1.2
CAPN1-220ENST00000530567 TTLL2Q9BWV7 592 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 EDEM3Q9BZQ6 932 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 IL37Q9NZH6 218 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 HESX1Q9UBX0 185 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 MYO6Q9UM54 1294 aa22.55■■□□□ 1.2
CAPN1-220ENST00000530567 DOCK8Q8NF50 2099 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 M0QYV0 167 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 GYPCP04921 128 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 BPIFB4P59827 614 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 MEA1Q16626 185 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 E4F1Q66K89 784 aaPredicted RBP22.54■■□□□ 1.2
CAPN1-220ENST00000530567 GAREM2Q75VX8 874 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 TMEM150AQ86TG1 271 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 NOP9Q86U38 636 aaKnown RBP22.54■■□□□ 1.2
CAPN1-220ENST00000530567 NUP93Q8N1F7 819 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 LEMD2Q8NC56 503 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 SCAMP5Q8TAC9 235 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 ITFG1Q8TB96 612 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 ASB2Q96Q27 587 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 NUP58Q9BVL2 599 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 TRIM5Q9C035 493 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 NOCTQ9UK39 431 aaKnown RBP22.54■■□□□ 1.2
CAPN1-220ENST00000530567 OBSL1O75147 1896 aa22.54■■□□□ 1.2
CAPN1-220ENST00000530567 A0A1W2PQJ5 194 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 LRRC53A6NM62 1247 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 XPO1O14980 1071 aaKnown RBP22.53■■□□□ 1.2
CAPN1-220ENST00000530567 MED7O43513 233 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 TADA3O75528 432 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 SETSIPP0DME0 302 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 MYL4P12829 197 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 FSHRP23945 695 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 POTEHQ6S545 545 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 PDZD4Q76G19 769 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-220ENST00000530567 PIGZQ86VD9 579 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 SHKBP1Q8TBC3 707 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 SLC35F5Q8WV83 523 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 SECISBP2LQ93073 1101 aaKnown RBP22.53■■□□□ 1.2
CAPN1-220ENST00000530567 UBXN6Q9BZV1 441 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 PCDHGC3Q9UN70 934 aa22.53■■□□□ 1.2
CAPN1-220ENST00000530567 MAGED2Q9UNF1 606 aaPredicted RBP22.53■■□□□ 1.2
CAPN1-220ENST00000530567 BMP1P13497 986 aa22.52■■□□□ 1.2
CAPN1-220ENST00000530567 PLA2G4AP47712 749 aa22.52■■□□□ 1.2
CAPN1-220ENST00000530567 SPECC1LQ69YQ0 1117 aa22.52■■□□□ 1.2
CAPN1-220ENST00000530567 DENND4CQ5VZ89 1909 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 FAM92AA1XBS5 289 aa22.51■■□□□ 1.19
CAPN1-220ENST00000530567 GABBR2O75899 941 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms