RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 PLXND1Q9Y4D7 1925 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PIGNO95427 931 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CHRNA1P02708 482 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC166P0CW27 439 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 C6P13671 934 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CNTFP26441 200 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CD97P48960 835 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 HNRNPUQ00839 825 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NRG1Q02297 640 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CSTF3Q12996 717 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 DPYSL2Q16555 572 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PTPN21Q16825 1174 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 HADHQ16836 314 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CCDC40Q4G0X9 1142 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 TUBA3EQ6PEY2 450 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ELMSAN1Q6PJG2 1045 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 C17orf99Q6UX52 265 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZNF574Q6ZN55 896 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 BEND4Q6ZU67 534 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CHST15Q7LFX5 561 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 OTOP1Q7RTM1 612 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 LZICQ8WZA0 190 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 TMEM68Q96MH6 324 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NLRP4Q96MN2 994 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZNF518BQ9C0D4 1074 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 TCF7L1Q9HCS4 588 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PRKAG3Q9UGI9 489 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SCAF8Q9UPN6 1271 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 C1orf232A0A0U1RR37 186 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 FAM237AA0A1B0GTK4 181 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MAGEB16A2A368 324 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 LRRC14BA6NHZ5 514 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NCF1BA6NI72 391 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 LRRIQ4A6NIV6 560 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NCF1CA8MVU1 366 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 FLOT1O75955 427 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 IFNB1P01574 187 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GSTT2P0CG29 244 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GSTT2BP0CG30 244 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MYBP10242 640 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RHCEP18577 417 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 COL9A1P20849 921 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ACAT1P24752 427 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PDIA3P30101 505 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CCT6AP40227 531 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SOX9P48436 509 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 HIRAP54198 1017 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 IFI35P80217 286 aaPredicted RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RHDQ02161 417 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ENPEPQ07075 957 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NCOA4Q13772 614 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NCF4Q15080 339 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 USP39Q53GS9 565 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZMYM1Q5SVZ6 1142 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NCAPH2Q6IBW4 605 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZNF783Q6ZMS7 281 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MARK2Q7KZI7 788 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 STK32CQ86UX6 486 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZFPM1Q8IX07 1006 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ALDH16A1Q8IZ83 802 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SLC38A6Q8IZM9 456 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 DDI1Q8WTU0 396 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RUBCNQ92622 972 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 PGBD1Q96JS3 809 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ART5Q96L15 291 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 AK8Q96MA6 479 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 EYA3Q99504 573 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 API5Q9BZZ5 524 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 DRC3Q9H069 523 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZCWPW1Q9H0M4 648 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SLC39A2Q9NP94 309 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 BATF3Q9NR55 127 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NSMCE4AQ9NXX6 385 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 NINJ2Q9NZG7 142 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ZSWIM5Q9P217 1185 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 MBD2Q9UBB5 411 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 REV1Q9UBZ9 1251 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ASIC3Q9UHC3 531 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SAP30BPQ9UHR5 308 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 RASAL2Q9UJF2 1139 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 CNOT11Q9UKZ1 510 aaKnown RBP3.92□□□□□ -1.78
PTPN22-207ENST00000528414 DENND2AQ9ULE3 1009 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 GAB2Q9UQC2 676 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 SH3GLB1Q9Y371 365 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 AK5Q9Y6K8 562 aa3.92□□□□□ -1.78
PTPN22-207ENST00000528414 ERICH2A1L162 156 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 A6NLC8 198 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 APOL1O14791 398 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 SMAD6O43541 496 aaKnown RBP3.91□□□□□ -1.78
PTPN22-207ENST00000528414 CBR3O75828 277 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 RBBP9O75884 186 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 DGAT1O75907 488 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 RECQL4O94761 1208 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 SERPINF2P08697 491 aa3.91□□□□□ -1.78
PTPN22-207ENST00000528414 PORP16435 677 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-207ENST00000528414 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
PTPN22-207ENST00000528414 KRT2P35908 639 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms