RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ZSCAN22P10073 491 aaPredicted RBP16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 IFNAR2P48551 515 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 CASP4P49662 377 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 USP4Q13107 963 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 PKP1Q13835 747 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 WDR72Q3MJ13 1102 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 VSTM1Q6UX27 236 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 DENND5BQ6ZUT9 1274 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 HS2ST1Q7LGA3 356 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 KBTBD6Q86V97 674 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 CPA6Q8N4T0 437 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 XXYLT1Q8NBI6 393 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 SNX21Q969T3 373 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 FNBP1Q96RU3 617 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 RNF38Q9H0F5 515 aa16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 NXF1Q9UBU9 619 aaKnown RBP16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 CNOT1A5YKK6 2376 aaKnown RBP16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 CLDN5O00501 218 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ATG13O75143 517 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 TACC1O75410 805 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 F13A1P00488 732 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 DRD1P21728 446 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 SDHBP21912 280 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ME1P48163 572 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 AMPD2Q01433 879 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 KCNB1Q14721 858 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 CSRP2Q16527 193 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 PRR23CQ6ZRP0 262 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 GAB3Q8WWW8 586 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 CD101Q93033 1021 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 HHIPQ96QV1 700 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 RTKNQ9BST9 563 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 B3GNT5Q9BYG0 378 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ARRDC1-AS1Q9H2J1 176 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 TRPM5Q9NZQ8 1165 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 MYOFQ9NZM1 2061 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 PTPRDP23468 1912 aa16.57■□□□□ 0.24
CLNS1A-210ENST00000528364 ZNF840PA6NDX5 716 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 LEFTY2O00292 366 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 LRP3O75074 770 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 RPP40O75818 363 aaKnown RBP16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 ABL1P00519 1130 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 ANXA13P27216 316 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 CDH8P55286 799 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 PSMD2Q13200 908 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 TRPC3Q13507 836 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 SF3A2Q15428 464 aaKnown RBP16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 MAPRE1Q15691 268 aaKnown RBP16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 TTLL2Q9BWV7 592 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 XYLT2Q9H1B5 865 aa16.56■□□□□ 0.24
CLNS1A-210ENST00000528364 PVALEFA0A1B0GWK0 134 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 A8MXQ7 604 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 SLC30A4O14863 429 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 DCLK1O15075 740 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 KLRC4O43908 158 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 EXOC3O60645 756 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 OPRD1P41143 372 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 RAP1GAPP47736 663 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 TNNC1P63316 161 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 DNM1Q05193 864 aaKnown RBP16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 TAF10Q12962 218 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 KNOP1Q1ED39 458 aaKnown RBP16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 BMT2Q1RMZ1 405 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 GAB4Q2WGN9 574 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 CACNA2D4Q7Z3S7 1137 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 ATP2A3Q93084 1043 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 C8orf48Q96LL4 319 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 SMOC1Q9H4F8 434 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 SMYD3Q9H7B4 428 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 RXFP3Q9NSD7 469 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 SMPD4Q9NXE4 827 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 FAM13BQ9NYF5 915 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 EML5Q05BV3 1969 aa16.55■□□□□ 0.24
CLNS1A-210ENST00000528364 UBE4BO95155 1302 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 TRIM66O15016 1216 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 PHACTR2O75167 634 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 TCF3P15923 654 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 SLC6A11P48066 632 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 SNRPFP62306 86 aaKnown RBP16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 STK4Q13043 487 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 NR1H3Q13133 447 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 TDRD10Q5VZ19 366 aaKnown RBP16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 SFTPA1Q8IWL2 248 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 C12orf56Q8IXR9 622 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 NETO1Q8TDF5 533 aa16.54■□□□□ 0.24
CLNS1A-210ENST00000528364 KCNK16Q96T55 309 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms