RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PIAS3Q9Y6X2 628 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 RTN3O95197 1032 aaPredicted RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 EPB41P11171 864 aaKnown RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 HDCP19113 662 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 CASP4P49662 377 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 PSMC1P62191 440 aaKnown RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 CYP4F8P98187 520 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 FKBP3Q00688 224 aaKnown RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 NR1H3Q13133 447 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 COL9A2Q14055 689 aaPredicted RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 PDGFRLQ15198 375 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 MDH1BQ5I0G3 518 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 TXNDC8Q6A555 127 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 TMEM150AQ86TG1 271 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 NUP93Q8N1F7 819 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 CRYBG2Q8N1P7 616 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 STKLD1Q8NE28 680 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 PDZD8Q8NEN9 1154 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 IPO9Q96P70 1041 aaKnown RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 SLITRK1Q96PX8 696 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
CHD7-208ENST00000528280 LMAN1LQ9HAT1 526 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 GKN1Q9NS71 199 aa10.22□□□□□ -0.77
CHD7-208ENST00000528280 ARNTLO00327 626 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 NRG2O14511 850 aaPredicted RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 KINO60870 393 aaKnown RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 AKAP3O75969 853 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 VNN1O95497 513 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 LMNAP02545 664 aaKnown RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 CKMP06732 381 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 SP9P0CG40 484 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 TCF3P15923 654 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 CD72P21854 359 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 CCNE1P24864 410 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 TARSP26639 723 aaKnown RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 PIK3CAP42336 1068 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 PRCPP42785 496 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 GPR15P49685 360 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 DLG4P78352 724 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 LRRC63Q05C16 580 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 PNOCQ13519 176 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 WDR44Q5JSH3 913 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 STXBP5Q5T5C0 1151 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 KRT39Q6A163 491 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 CCDC26Q8TAB7 109 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 SPATA20Q8TB22 786 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 PLEKHO2Q8TD55 490 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 OVCA2Q8WZ82 227 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 USP13Q92995 863 aaPredicted RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 DHTKD1Q96HY7 919 aaPredicted RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 FAM83CQ9BQN1 747 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 MED10Q9BTT4 135 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 TTLL2Q9BWV7 592 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 TMEM8AQ9HCN3 771 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 MTF2Q9Y483 593 aaPredicted RBP10.21□□□□□ -0.77
CHD7-208ENST00000528280 PCDHA5Q9Y5H7 936 aa10.21□□□□□ -0.77
CHD7-208ENST00000528280 F8VP50 259 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 SPECC1L-ADORA2AF8WAN1 911 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 SLC9A3R1O14745 358 aaPredicted RBP10.2□□□□□ -0.78
CHD7-208ENST00000528280 PSMA7O14818 248 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 ATG13O75143 517 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 HLA-DRAP01903 254 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 YWHAQP27348 245 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 TSC2P49815 1807 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 CCR3P51677 355 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 CDR1P51861 262 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 CDH8P55286 799 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 FZD5Q13467 585 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 RUNX3Q13761 415 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 ZCWPW2Q504Y3 356 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 SDHAF4Q5VUM1 108 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 FAM208BQ5VWN6 2430 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 DDX42Q86XP3 938 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD7-208ENST00000528280 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 RSPRY1Q96DX4 576 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 SMARCD1Q96GM5 515 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 LRRC3BQ96PB8 259 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 NT5C1AQ9BXI3 368 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 B3GNT5Q9BYG0 378 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 CHRDQ9H2X0 955 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 FBXO44Q9H4M3 255 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 METTL14Q9HCE5 456 aaKnown RBP10.2□□□□□ -0.78
CHD7-208ENST00000528280 TRPC7Q9HCX4 862 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 NDRG2Q9UN36 371 aaKnown RBP10.2□□□□□ -0.78
CHD7-208ENST00000528280 PCDHGA2Q9Y5H1 932 aa10.2□□□□□ -0.78
CHD7-208ENST00000528280 ZNF840PA6NDX5 716 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 SLC16A3O15427 465 aaKnown RBP10.19□□□□□ -0.78
CHD7-208ENST00000528280 HCRTO43612 131 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 PRAMEF12O95522 483 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CHRNB1P11230 501 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CTHP32929 405 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 CXCL12P48061 93 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 GCLMP48507 274 aa10.19□□□□□ -0.78
CHD7-208ENST00000528280 IFNAR2P48551 515 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms