RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 BORAQ6PGQ7 559 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 PADI6Q6TGC4 694 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 SV2AQ7L0J3 742 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 FERMT3Q86UX7 667 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 MIB1Q86YT6 1006 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 SIRT2Q8IXJ6 389 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 GALNT11Q8NCW6 608 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 APPL2Q8NEU8 664 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 SPATA3Q8NHX4 192 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 MRPS31Q92665 395 aaKnown RBP7.58□□□□□ -1.2
VPS26B-204ENST00000527586 DDX12PQ92771 950 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 HPS3Q969F9 1004 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 PPP1R10Q96QC0 940 aaKnown RBP7.58□□□□□ -1.2
VPS26B-204ENST00000527586 SPZ1Q9BXG8 430 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 BMP2KQ9NSY1 1161 aaPredicted RBP7.58□□□□□ -1.2
VPS26B-204ENST00000527586 USP36Q9P275 1121 aaKnown RBP7.58□□□□□ -1.2
VPS26B-204ENST00000527586 TUBD1Q9UJT1 453 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 HCN2Q9UL51 889 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 NUB1Q9Y5A7 615 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 RAD54BQ9Y620 910 aa7.58□□□□□ -1.2
VPS26B-204ENST00000527586 ARID2Q68CP9 1835 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 PMS2P1A4D2B8 440 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 MTMR11A4FU01 709 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 PODXLO00592 558 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 TRAK2O60296 914 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 OPA1O60313 960 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 NOBOXO60393 691 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 F11P03951 625 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 MARCKSP29966 332 aaPredicted RBP7.57□□□□□ -1.2
VPS26B-204ENST00000527586 OXTRP30559 389 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 EIF2DP41214 584 aaKnown RBP7.57□□□□□ -1.2
VPS26B-204ENST00000527586 NPEPPSP55786 919 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 NLRP12P59046 1061 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 GRIN1Q05586 938 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 GPR17Q13304 367 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 RSRC2Q7L4I2 434 aaKnown RBP7.57□□□□□ -1.2
VPS26B-204ENST00000527586 CLEC14AQ86T13 490 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 FTSJ3Q8IY81 847 aaKnown RBP7.57□□□□□ -1.2
VPS26B-204ENST00000527586 FAM9BQ8IZU0 186 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 ARL14Q8N4G2 192 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 SH3RF2Q8TEC5 729 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 CYP2S1Q96SQ9 504 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 ACOX2Q99424 681 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 SEPT5Q99719 369 aaPredicted RBP7.57□□□□□ -1.2
VPS26B-204ENST00000527586 TRPC7Q9HCX4 862 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 HELLSQ9NRZ9 838 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 PHTF1Q9UMS5 762 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 PCDHGA8Q9Y5G5 932 aa7.57□□□□□ -1.2
VPS26B-204ENST00000527586 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 TNFSF15O95150 251 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 THEGLP0DJG4 465 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 RLBP1P12271 317 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ATF6P18850 670 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SFNP31947 248 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 TPMTP51580 245 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 JAK3P52333 1124 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SETQ01105 290 aaPredicted RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 BNIP3Q12983 259 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ORC1Q13415 861 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 DHCR24Q15392 516 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ISXQ2M1V0 245 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 MANEAQ5SRI9 462 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 C10orf76Q5T2E6 689 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 EGFLAMQ63HQ2 1017 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ANO5Q75V66 913 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 METTL3Q86U44 580 aaKnown RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ZNF589Q86UQ0 364 aaPredicted RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 CHPFQ8IZ52 775 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 PHTF2Q8N3S3 785 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 EFCAB3Q8N7B9 438 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ZNF579Q8NAF0 562 aaKnown RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
VPS26B-204ENST00000527586 ATXN7L3BQ96GX2 97 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 LURAP1Q96LR2 239 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SLC22A12Q96S37 553 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 NUP58Q9BVL2 599 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 KRT23Q9C075 422 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 OSBPL2Q9H1P3 480 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 SENP2Q9HC62 589 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 GDAQ9Y2T3 454 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 STARD13Q9Y3M8 1113 aa7.56□□□□□ -1.2
VPS26B-204ENST00000527586 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 YKT6O15498 198 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 LDLRP01130 860 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 CKMP06732 381 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 USP17L7P0C7H9 530 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 CALM1P0DP23 149 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 CALM2P0DP24 149 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 CALM3P0DP25 149 aa7.55□□□□□ -1.2
VPS26B-204ENST00000527586 WT1P19544 449 aaPredicted RBP7.55□□□□□ -1.2
VPS26B-204ENST00000527586 EPHA8P29322 1005 aaPredicted RBP7.55□□□□□ -1.2
VPS26B-204ENST00000527586 MCM4P33991 863 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms