RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ADGRG1Q9Y653 693 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 CDY1Q9Y6F8 540 aa13.46□□□□□ -0.25
SSSCA1-203ENST00000526877 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 KMT2EQ8IZD2 1858 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 THAP12O43422 761 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 MED7O43513 233 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 ODC1P11926 461 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 HOXA9P31269 272 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 MAGEA1P43355 309 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 NDST1P52848 882 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 RAD23BP54727 409 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 GFPT1Q06210 699 aaPredicted RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 VARS2Q5ST30 1063 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 KIAA1328Q86T90 577 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 METTL23Q86XA0 190 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 ADGRF2Q8IZF7 708 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 TMEM86AQ8N2M4 240 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 OR6B3Q8NGW1 331 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 FAM122AQ96E09 287 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 TMEM176AQ96HP8 235 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 MRPL45Q9BRJ2 306 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 DESI2Q9BSY9 194 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 KCNH6Q9H252 994 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 KCND1Q9NSA2 647 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 EPS15L1Q9UBC2 864 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 NOCTQ9UK39 431 aaKnown RBP13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 DSEQ9UL01 958 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 KIAA1257Q9ULG3 409 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
SSSCA1-203ENST00000526877 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 A0A087X0T9 212 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 A8MXQ7 604 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 DDX3XO00571 662 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 SYN3O14994 580 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ABLIM3O94929 683 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 C8AP07357 584 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 FAM228BP0C875 321 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 CD19P15391 556 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 WARSP23381 471 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 LHX1P48742 406 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 CCDC122Q5T0U0 273 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 IER5LQ5T953 404 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ALKBH5Q6P6C2 394 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 LIMS2Q7Z4I7 341 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 CCAR2Q8N163 923 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ACRBPQ8NEB7 543 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 WHAMMQ8TF30 809 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 HEXIM2Q96MH2 286 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 TRMT1Q9NXH9 659 aaKnown RBP13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 PCDHA13Q9Y5I0 950 aa13.44□□□□□ -0.26
SSSCA1-203ENST00000526877 WDFY4Q6ZS81 3184 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 M0QZQ0 153 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 MMEP08473 750 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 POU2F2P09086 479 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 VDRP11473 427 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 LAMP2P13473 410 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 CHRNB2P17787 502 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 NTHL1P78549 312 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 FMO1Q01740 532 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 ROR1Q01973 937 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 CYP27A1Q02318 531 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 TDGQ13569 410 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 SGO2Q562F6 1265 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 LIN9Q5TKA1 542 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 PPP1R2P3Q6NXS1 205 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 RTL10Q7L3V2 364 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 GRASPQ7Z6J2 395 aaPredicted RBP13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC4A11Q8NBS3 891 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 SLC7A14Q8TBB6 771 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 KBTBD7Q8WVZ9 684 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 RSAD2Q8WXG1 361 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 DDX1Q92499 740 aaKnown RBP13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 TNIP3Q96KP6 325 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
SSSCA1-203ENST00000526877 PCDHB8Q9UN66 801 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms