RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DNAJB5O75953 348 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ZFPL1O95159 310 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ATXN1LP0C7T5 689 aaKnown RBP4.68□□□□□ -1.66
CD44-219ENST00000525685 SLC11A2P49281 568 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ANXA11P50995 505 aaKnown RBP4.68□□□□□ -1.66
CD44-219ENST00000525685 VAV2P52735 878 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 LONRF1Q17RB8 773 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 GEN1Q17RS7 908 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ERCC6LQ2NKX8 1250 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 C3orf38Q5JPI3 329 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 SYCP2LQ5T4T6 812 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 TAF2Q6P1X5 1199 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 AFAP1Q8N556 730 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 CCDC33Q8N5R6 958 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 Q8NA96 180 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 FBXO41Q8TF61 875 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 RAPGEF4Q8WZA2 1011 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 VOPP1Q96AW1 172 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 PTCD3Q96EY7 689 aaKnown RBP4.68□□□□□ -1.66
CD44-219ENST00000525685 HEPHQ9BQS7 1158 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ZNF518BQ9C0D4 1074 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 UNKLQ9H9P5 680 aaKnown RBP4.68□□□□□ -1.66
CD44-219ENST00000525685 CASS4Q9NQ75 786 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 A1CFQ9NQ94 594 aaKnown RBP4.68□□□□□ -1.66
CD44-219ENST00000525685 PTGFRNQ9P2B2 879 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 SHOC2Q9UQ13 582 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 DMTF1Q9Y222 760 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 INSL6Q9Y581 213 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 ATP10AO60312 1499 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 SHANK2Q9UPX8 1470 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 MADDQ8WXG6 1647 aa4.68□□□□□ -1.66
CD44-219ENST00000525685 MYO1FO00160 1098 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 FOXN3O00409 490 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 KPNA5O15131 536 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 SUN1O94901 812 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 CYP2C9P11712 490 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 NPTX2P47972 431 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 GCLCP48506 637 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 PXNP49023 591 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 NDUFV1P49821 464 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 HNRNPMP52272 730 aaKnown RBP eCLIP4.67□□□□□ -1.66
CD44-219ENST00000525685 ARFIP2P53365 341 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 DYRK1AQ13627 763 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 CCDC142Q17RM4 750 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 TMEM108Q6UXF1 575 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 FAM98AQ8NCA5 519 aaKnown RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 B3GALNT2Q8NCR0 500 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 SMCR8Q8TEV9 937 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 IPCEF1Q8WWN9 437 aaPredicted RBP4.67□□□□□ -1.66
CD44-219ENST00000525685 PHKBQ93100 1093 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 MYD88Q99836 296 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 BTBD1Q9H0C5 482 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 SMOC2Q9H3U7 446 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 HESX1Q9UBX0 185 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 AGLP35573 1532 aa4.67□□□□□ -1.66
CD44-219ENST00000525685 FER1L4A9Z1Z3 1794 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 RTEL1-TNFRSF6BF6WH68 1400 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 ABCC5O15440 1437 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 DAPK1P53355 1430 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 A0A0B4J269 797 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 TMEM233B4DJY2 109 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 E7ENX8 843 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 CD6P30203 668 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 PIK3CBP42338 1070 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 PTH2RP49190 550 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 PRKAG1P54619 331 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 AK2P54819 239 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 RPS16P62249 146 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 SIM1P81133 766 aaPredicted RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 MC2RQ01718 297 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 TAP2Q03519 686 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 TUBB3Q13509 450 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 MGAT5BQ3V5L5 792 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 FBXO42Q6P3S6 717 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 MICALCLQ6ZW33 695 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 RD3Q7Z3Z2 195 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 LIX1LQ8IVB5 337 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 ADGRG5Q8IZF4 528 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 KRT78Q8N1N4 520 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 LNX2Q8N448 690 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 TOR1AIP2Q8NFQ8 470 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 POC1BQ8TC44 478 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 CCDC138Q96M89 665 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 STRBPQ96SI9 672 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 AIFM2Q9BRQ8 373 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 SPATA5L1Q9BVQ7 753 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 TPSD1Q9BZJ3 242 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 UNKQ9C0B0 810 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 INTS13Q9NVM9 706 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 MRPS18AQ9NVS2 196 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 KCTD5Q9NXV2 234 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 FOXJ2Q9P0K8 574 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 CTTNBP2NLQ9P2B4 639 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 CEP83Q9Y592 693 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 A2MP01023 1474 aa4.66□□□□□ -1.66
CD44-219ENST00000525685 RIMS1Q86UR5 1692 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 SPAG9O60271 1321 aaKnown RBP4.66□□□□□ -1.66
CD44-219ENST00000525685 RRBP1Q9P2E9 1410 aaKnown RBP4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms