RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 VSTM1Q6UX27 236 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 DPH6Q7L8W6 267 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 LIMS2Q7Z4I7 341 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 SPATA17Q96L03 361 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 FRYQ5TBA9 3013 aa25.61■■□□□ 1.69
USP47-205ENST00000525257 BCLAF3A2AJT9 711 aaKnown RBP25.6■■□□□ 1.69
USP47-205ENST00000525257 ANTXRLA6NF34 631 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 PDCP20941 246 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 OPRD1P41143 372 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 PDE6CP51160 858 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 PSAPL1Q6NUJ1 521 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 DENND5BQ6ZUT9 1274 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 CBWD2Q8IUF1 395 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 GLIS3Q8NEA6 775 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 USP33Q8TEY7 942 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 TRPM5Q9NZQ8 1165 aa25.6■■□□□ 1.69
USP47-205ENST00000525257 NUP205Q92621 2012 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 ZNF233A6NK53 670 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 K7EQS6 105 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 LEFTY2O00292 366 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 ANXA13P27216 316 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 SHC2P98077 582 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 MAPRE1Q15691 268 aaKnown RBP25.59■■□□□ 1.69
USP47-205ENST00000525257 ANO7Q6IWH7 933 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 CCDC65Q8IXS2 484 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 ABCA7Q8IZY2 2146 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 PDILTQ8N807 584 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 CCDC26Q8TAB7 109 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 HPS3Q969F9 1004 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 MMS19Q96T76 1030 aa25.59■■□□□ 1.69
USP47-205ENST00000525257 C4orf47A7E2U8 309 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 KIAA0391O15091 583 aaKnown RBP25.58■■□□□ 1.69
USP47-205ENST00000525257 WARSP23381 471 aaKnown RBP25.58■■□□□ 1.69
USP47-205ENST00000525257 CUL4AQ13619 759 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 DUOXA2Q1HG44 320 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 GAB4Q2WGN9 574 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 USP39Q53GS9 565 aaKnown RBP25.58■■□□□ 1.69
USP47-205ENST00000525257 PMS2CLQ68D20 193 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 CCDC33Q8N5R6 958 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 PCED1BQ96HM7 432 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 THADAQ6YHU6 1953 aa25.58■■□□□ 1.69
USP47-205ENST00000525257 SCAMP3O14828 347 aaKnown RBP25.57■■□□□ 1.68
USP47-205ENST00000525257 CYP17A1P05093 508 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 SURF1Q15526 300 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 MDH1BQ5I0G3 518 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 FILIP1Q7Z7B0 1213 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 TTC30AQ86WT1 665 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 USP28Q96RU2 1077 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 HSPBP1Q9NZL4 362 aa25.57■■□□□ 1.68
USP47-205ENST00000525257 LNP1A1A4G5 178 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 F8VP50 259 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 TRIM66O15016 1216 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 ABL1P00519 1130 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 PFKLP17858 780 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 BCKDHBP21953 392 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 STXBP4Q6ZWJ1 553 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 RASSF3Q86WH2 238 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 WDR49Q8IV35 697 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 MYCBPAPQ8TBZ2 947 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 CEP295NLQ96MC4 621 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 MRPL45Q9BRJ2 306 aaKnown RBP25.56■■□□□ 1.68
USP47-205ENST00000525257 TTLL2Q9BWV7 592 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 RNF38Q9H0F5 515 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 SMPD4Q9NXE4 827 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 MMP17Q9ULZ9 603 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 CPQQ9Y646 472 aa25.56■■□□□ 1.68
USP47-205ENST00000525257 ZNF840PA6NDX5 716 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 GIPC1O14908 333 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 SYT1P21579 422 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 NOVA1P51513 510 aaKnown RBP25.55■■□□□ 1.68
USP47-205ENST00000525257 HS2ST1Q7LGA3 356 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 TRAPPC11Q7Z392 1133 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 C11orf74Q86VG3 221 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 SFTPA1Q8IWL2 248 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 MDGA1Q8NFP4 955 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 CNOT6LQ96LI5 555 aaKnown RBP25.55■■□□□ 1.68
USP47-205ENST00000525257 SNX25Q9H3E2 840 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 EHD2Q9NZN4 543 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 NME7Q9Y5B8 376 aa25.55■■□□□ 1.68
USP47-205ENST00000525257 HOXD13P35453 343 aa25.54■■□□□ 1.68
USP47-205ENST00000525257 SLC7A9P82251 487 aa25.54■■□□□ 1.68
USP47-205ENST00000525257 IFRD2Q12894 506 aaPredicted RBP25.54■■□□□ 1.68
USP47-205ENST00000525257 SLC39A14Q15043 492 aa25.54■■□□□ 1.68
USP47-205ENST00000525257 CRY1Q16526 586 aa25.54■■□□□ 1.68
USP47-205ENST00000525257 CYP2U1Q7Z449 544 aa25.54■■□□□ 1.68
USP47-205ENST00000525257 PATE3B3GLJ2 98 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 KHNYNO15037 678 aaKnown RBP25.53■■□□□ 1.68
USP47-205ENST00000525257 DLATP10515 647 aaKnown RBP25.53■■□□□ 1.68
USP47-205ENST00000525257 GNL1P36915 607 aaPredicted RBP25.53■■□□□ 1.68
USP47-205ENST00000525257 SLC6A11P48066 632 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 DHPSP49366 369 aaPredicted RBP25.53■■□□□ 1.68
USP47-205ENST00000525257 CACNA2D1P54289 1103 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 NOP14P78316 857 aaKnown RBP25.53■■□□□ 1.68
USP47-205ENST00000525257 MESP2Q0VG99 397 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 DHCR24Q15392 516 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 DAB2IPQ5VWQ8 1189 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 TMEM92Q6UXU6 159 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 ADGRG2Q8IZP9 1017 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 ALLCQ8N6M5 410 aa25.53■■□□□ 1.68
USP47-205ENST00000525257 RDH13Q8NBN7 331 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms