RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TXNRD1Q16881 649 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 KAZNQ674X7 775 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 RSPH3Q86UC2 560 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 C8orf58Q8NAV2 365 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 IL17RDQ8NFM7 739 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 ATL2Q8NHH9 583 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 IFI44Q8TCB0 444 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 DPF2Q92785 391 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 HDAC10Q969S8 669 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TMEM125Q96AQ2 219 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TMX3Q96JJ7 454 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 TLR10Q9BXR5 811 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 ASB6Q9NWX5 421 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 JKAMPQ9P055 326 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 CTTNBP2NLQ9P2B4 639 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 MCM8Q9UJA3 840 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 CDYLQ9Y232 598 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 BRCA1P38398 1863 aaKnown RBP3.73□□□□□ -1.81
CSDE1-208ENST00000524652 NRXN2Q9P2S2 1712 aa3.73□□□□□ -1.81
CSDE1-208ENST00000524652 SPEF2Q9C093 1822 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 KIF13BQ9NQT8 1826 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 NDUFS2O75306 463 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 POU3F3P20264 500 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 GPD1P21695 349 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PROK1P58294 105 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 EXOSC9Q06265 439 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PIGFQ07326 219 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 LMOD3Q0VAK6 560 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 DYRK1AQ13627 763 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 HLXQ14774 488 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 RAB39AQ14964 217 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PTPRRQ15256 657 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 INAVAQ3KP66 663 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 AKNAD1Q5T1N1 836 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 UTP14CQ5TAP6 766 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PAPD7Q5XG87 772 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF788Q6ZQV5 615 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 ZNF365Q70YC5 407 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 NECAB2Q7Z6G3 386 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PEG10Q86TG7 708 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 WDR63Q8IWG1 891 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 CNTD1Q8N815 330 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 NAF1Q96HR8 494 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 FBXL20Q96IG2 436 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PGBD1Q96JS3 809 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PACSIN1Q9BY11 444 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 PUS7LQ9H0K6 701 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 WDR26Q9H7D7 661 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 TSPYL4Q9UJ04 414 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 TUBD1Q9UJT1 453 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 LAS1LQ9Y4W2 734 aaKnown RBP3.72□□□□□ -1.81
CSDE1-208ENST00000524652 USP16Q9Y5T5 823 aa3.72□□□□□ -1.81
CSDE1-208ENST00000524652 TNRC6CQ9HCJ0 1690 aaKnown RBP3.71□□□□□ -1.81
CSDE1-208ENST00000524652 IL16Q14005 1332 aa3.71□□□□□ -1.81
CSDE1-208ENST00000524652 A0A1B0GUL6 1792 aa3.71□□□□□ -1.81
CSDE1-208ENST00000524652 CCDC195A0A1B0GUA6 201 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CGB1A6NKQ9 187 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 E7ENX8 843 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 TCERG1O14776 1098 aaKnown RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SLC43A1O75387 559 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SUN1O94901 812 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 ANXA1P04083 346 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CD1AP06126 327 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SBK3P0C264 359 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CYP19A1P11511 503 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 GATA3P23771 443 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 ANXA11P50995 505 aaKnown RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 GNAI1P63096 354 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 KRT85P78386 507 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 POU6F2P78424 691 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 TAP2Q03519 686 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 FPGSQ05932 587 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CLUL1Q15846 466 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 PROSER3Q2NL68 480 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CD300EQ496F6 205 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 PREPLQ4J6C6 727 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 MICALCLQ6ZW33 695 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 TMPRSS9Q7Z410 1059 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 GLCCI1Q86VQ1 547 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 ADGRG5Q8IZF4 528 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SH2D3CQ8N5H7 860 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 PPM1NQ8N819 430 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 C1orf162Q8NEQ5 155 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SLC30A5Q8TAD4 765 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 TFAP2BQ92481 460 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 LPIN2Q92539 896 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 SNX19Q92543 992 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 KLHL32Q96NJ5 620 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 FAM126AQ9BYI3 521 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 VSX1Q9NZR4 365 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 CCNL1Q9UK58 526 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-208ENST00000524652 ZBTB1Q9Y2K1 713 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 COL4A1P02462 1669 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 DLEC1Q9Y238 1755 aa3.71□□□□□ -1.82
CSDE1-208ENST00000524652 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 WIPF3A6NGB9 483 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 GCOM1H8Y6P7 765 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-208ENST00000524652 TOR1BO14657 336 aa3.7□□□□□ -1.82
CSDE1-208ENST00000524652 A1BGP04217 495 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms