RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ARHGEF19Q8IW93 802 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 SLC30A5Q8TAD4 765 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 DNAJB14Q8TBM8 379 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 PROKR1Q8TCW9 393 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 PGBD1Q96JS3 809 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 HERPUD2Q9BSE4 406 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 CHMP4AQ9BY43 222 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 AMBRA1Q9C0C7 1298 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 GBA2Q9HCG7 927 aaPredicted RBP4.62□□□□□ -1.67
SKP1-212ENST00000523966 NECTIN3Q9NQS3 549 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 RGL1Q9NZL6 768 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 DKK4Q9UBT3 224 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 CCNL1Q9UK58 526 aaPredicted RBP4.62□□□□□ -1.67
SKP1-212ENST00000523966 HPSEQ9Y251 543 aa4.62□□□□□ -1.67
SKP1-212ENST00000523966 ORC4O43929 436 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ZFPL1O95159 310 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 NDST3O95803 873 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SRGNP10124 158 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 PPP3CBP16298 524 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 NR4A1P22736 598 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 EPHA3P29320 983 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CHKAP35790 457 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 IL6STP40189 918 aaPredicted RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 KCNAB1Q14722 419 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SF3B3Q15393 1217 aaKnown RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 CDSNQ15517 529 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ZIK1Q3SY52 487 aaPredicted RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 DEPDC1Q5TB30 811 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 VPS53Q5VIR6 699 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ABHD17BQ5VST6 288 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 FCRL6Q6DN72 434 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 MRNIPQ6NTE8 343 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CCDC174Q6PII3 467 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CRTC1Q6UUV9 634 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 KCTD20Q7Z5Y7 419 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 RAB11FIP4Q86YS3 637 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CERS3Q8IU89 383 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ANKRD42Q8N9B4 389 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SPATA5Q8NB90 893 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 GLIS1Q8NBF1 620 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CYP2W1Q8TAV3 490 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CACTINQ8WUQ7 758 aaKnown RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 TMEM171Q8WVE6 324 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 FBXL20Q96IG2 436 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SCLT1Q96NL6 688 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ADAM2Q99965 735 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 DPCDQ9BVM2 203 aaPredicted RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 PCDHAC1Q9H158 963 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SLC25A32Q9H2D1 315 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CXorf36Q9H7Y0 433 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 CYP4F11Q9HBI6 524 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 GLOD4Q9HC38 313 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 SLC2A4RGQ9NR83 387 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 LRFN1Q9P244 771 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 DNMT3BQ9UBC3 853 aaKnown RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 DNAJB11Q9UBS4 358 aa4.61□□□□□ -1.67
SKP1-212ENST00000523966 ZMYND8Q9ULU4 1186 aaPredicted RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.61□□□□□ -1.67
SKP1-212ENST00000523966 CENPVL1A0A0U1RR11 272 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 PPM1DO15297 605 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 LPXNO60711 386 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 CSTBP04080 98 aaKnown RBP4.6□□□□□ -1.67
SKP1-212ENST00000523966 SRGAP2BP0DMP2 458 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 MAKP20794 623 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 AVPR1BP47901 424 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 GATMP50440 423 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 PGDP52209 483 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 BCAT1P54687 386 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 DGCR2P98153 550 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 FSTL1Q12841 308 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 RAB30Q15771 203 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 MAPKAPK3Q16644 382 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 PTCHD3Q3KNS1 767 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 ZACNQ401N2 412 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 GPR149Q86SP6 731 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 ABRAQ8N0Z2 381 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 SSH3Q8TE77 659 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 ABHD5Q8WTS1 349 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 FKBP10Q96AY3 582 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 HIST1H2AAQ96QV6 131 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 AIFM2Q9BRQ8 373 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 WDR11Q9BZH6 1224 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 TRIM5Q9C035 493 aa4.6□□□□□ -1.67
SKP1-212ENST00000523966 INO80BQ9C086 356 aaPredicted RBP4.6□□□□□ -1.67
SKP1-212ENST00000523966 PIPSLA2A3N6 862 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 PIP5K1BO14986 540 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 YY2O15391 372 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 SLC16A3O15427 465 aaKnown RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 CD3EAPO15446 510 aaKnown RBP4.59□□□□□ -1.67
SKP1-212ENST00000523966 NBNO60934 754 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 NXPH3O95157 252 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ADRB1P08588 477 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 CD19P15391 556 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 YY1P25490 414 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 GABRB3P28472 473 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 ADORA2AP29274 412 aa4.59□□□□□ -1.67
SKP1-212ENST00000523966 HALP42357 657 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms