RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 PLD1Q13393 1074 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 TRPC3Q13507 836 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 NFIL3Q16649 462 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 PLA2G2CQ5R387 149 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 CYP4A22Q5TCH4 519 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 ZNF658Q5TYW1 1059 aaPredicted RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 UNQ6494/PRO21346Q6UXR6 183 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 GAREM2Q75VX8 874 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 DNAJB7Q7Z6W7 309 aaPredicted RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 WDR5BQ86VZ2 330 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 DCP1BQ8IZD4 617 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 SPPL2BQ8TCT7 592 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 PSMG2Q969U7 264 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 CRTAC1Q9NQ79 661 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 HSFX1Q9UBD0 423 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 NXF1Q9UBU9 619 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 PCDHB5Q9Y5E4 795 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 HELZP42694 1942 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 DSPP15924 2871 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 TRIM49BA6NDI0 452 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 PHACTR2O75167 634 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 CLSTN1O94985 981 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 CYP2F1P24903 491 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 LHX1P48742 406 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 PMS1P54277 932 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 NCOA4Q13772 614 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 SCARA5Q6ZMJ2 495 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 DPH6Q7L8W6 267 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 MFSD6LQ8IWD5 586 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 C2orf15Q8WU43 125 aaKnown RBP16.11■□□□□ 0.17
PCM1-218ENST00000523055 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 SYT15Q9BQS2 421 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 DPEP3Q9H4B8 488 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 SMYD3Q9H7B4 428 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCM1-218ENST00000523055 RMND1Q9NWS8 449 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 FRMD4BQ9Y2L6 1034 aa16.11■□□□□ 0.17
PCM1-218ENST00000523055 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 SMG1Q96Q15 3661 aaKnown RBP16.1■□□□□ 0.17
PCM1-218ENST00000523055 ZNF197O14709 1029 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 ZNF263O14978 683 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 EPN2O95208 641 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 WARSP23381 471 aaKnown RBP16.1■□□□□ 0.17
PCM1-218ENST00000523055 GABRR2P28476 465 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 TUFMP49411 452 aaKnown RBP16.1■□□□□ 0.17
PCM1-218ENST00000523055 VAMP7P51809 220 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 TNNC1P63316 161 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 PPP3CAQ08209 521 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 ADAM9Q13443 819 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 DDR2Q16832 855 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 ZNF699Q32M78 642 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 ZACNQ401N2 412 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 SPOPLQ6IQ16 392 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 SV2AQ7L0J3 742 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 GPIHBP1Q8IV16 184 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 SPATA18Q8TC71 538 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 TMC2Q8TDI7 906 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 MYLPFQ96A32 169 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 LOXL4Q96JB6 756 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 SMOC1Q9H4F8 434 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 IL21Q9HBE4 155 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
PCM1-218ENST00000523055 LAMA5O15230 3695 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 LOC400499M0QZD8 3231 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 HEPACAM2A8MVW5 462 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 SMC2O95347 1197 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 CD44P16070 742 aaKnown RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 PCSK1P29120 753 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 CDH8P55286 799 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 CYP4F8P98187 520 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 SMARCB1Q12824 385 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 CCINQ13939 588 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 CEP68Q76N32 757 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 C12orf50Q8NA57 414 aaPredicted RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 LEMD2Q8NC56 503 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 OR6B3Q8NGW1 331 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 ZSCAN18Q8TBC5 510 aaPredicted RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
PCM1-218ENST00000523055 MKNK1Q9BUB5 465 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 SDCBP2Q9H190 292 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 SLITRK6Q9H5Y7 841 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 ASB3Q9Y575 518 aa16.09■□□□□ 0.17
PCM1-218ENST00000523055 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 GIPC1O14908 333 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 MAPK13O15264 365 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 TACC1O75410 805 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
PCM1-218ENST00000523055 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
PCM1-218ENST00000523055 BMP6P22004 513 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms