RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 OPRD1P41143 372 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 STAT6P42226 847 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 DGKEP52429 567 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ZXDBP98169 803 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 E2F4Q16254 413 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ST3GAL2Q16842 350 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 SDHAF4Q5VUM1 108 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 SNX30Q5VWJ9 437 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 EPM2AIP1Q7L775 607 aaPredicted RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
SDC2-207ENST00000522911 ADGRG2Q8IZP9 1017 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ARL14EPQ8N8R7 260 aaPredicted RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ZNF507Q8TCN5 953 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 KCNV2Q8TDN2 545 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 OTUB2Q96DC9 234 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 CNOT6LQ96LI5 555 aaKnown RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 CLIC6Q96NY7 704 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 VRTNQ9H8Y1 702 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 CRTAC1Q9NQ79 661 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 RXFP3Q9NSD7 469 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 EVLQ9UI08 416 aaPredicted RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 MMP17Q9ULZ9 603 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 UBE4BO95155 1302 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 PTPRJQ12913 1337 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ANAPC1Q9H1A4 1944 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 KIAA1549LQ6ZVL6 1849 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 EML5Q05BV3 1969 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 A0A087X0B3 334 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 VPS37CA5D8V6 355 aaPredicted RBP10.03□□□□□ -0.8
SDC2-207ENST00000522911 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 KRT37O76014 449 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 KCNK5O95279 499 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 CAVIN2O95810 425 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 KRT19P08727 400 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 IDEP14735 1019 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 SYT1P21579 422 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 LMO2P25791 158 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 HOXD12P35452 270 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 HOXD13P35453 343 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 DPP6P42658 865 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 AMPD3Q01432 767 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 EHHADHQ08426 723 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 USP39Q53GS9 565 aaKnown RBP10.03□□□□□ -0.8
SDC2-207ENST00000522911 N4BP2L1Q5TBK1 243 aaPredicted RBP10.03□□□□□ -0.8
SDC2-207ENST00000522911 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
SDC2-207ENST00000522911 SCARA3Q6AZY7 606 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 TRAPPC11Q7Z392 1133 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 OR5B17Q8NGF7 314 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 PCED1BQ96HM7 432 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 HHIPQ96QV1 700 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 FGFBP2Q9BYJ0 223 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 ELOVL4Q9GZR5 314 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 LINC00597Q9H2U6 94 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 TRPC7Q9HCX4 862 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 IL37Q9NZH6 218 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 TBC1D7Q9P0N9 293 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 R3HCC1Q9Y3T6 440 aaKnown RBP10.03□□□□□ -0.8
SDC2-207ENST00000522911 WNT6Q9Y6F9 365 aa10.03□□□□□ -0.8
SDC2-207ENST00000522911 E2F8A0AVK6 867 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 LNP1A1A4G5 178 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 FAM92AA1XBS5 289 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 GOLGA8IPA6NC78 632 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 LEFTY2O00292 366 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PPP6R2O75170 966 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 ATP2C2O75185 946 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PRPF6O94906 941 aaKnown RBP10.02□□□□□ -0.81
SDC2-207ENST00000522911 CYP17A1P05093 508 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PDIA4P13667 645 aaKnown RBP10.02□□□□□ -0.81
SDC2-207ENST00000522911 CSRP1P21291 193 aaKnown RBP10.02□□□□□ -0.81
SDC2-207ENST00000522911 BDNFP23560 247 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 ATICP31939 592 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 TUBP50607 506 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 USP46P62068 366 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PSMD6Q15008 389 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 CRY1Q16526 586 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
SDC2-207ENST00000522911 CCDC142Q17RM4 750 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 BMT2Q1RMZ1 405 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PEAR1Q5VY43 1037 aaPredicted RBP10.02□□□□□ -0.81
SDC2-207ENST00000522911 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 CBWD2Q8IUF1 395 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 SCN4BQ8IWT1 228 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 LINC00301Q8NCQ3 95 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PDZD8Q8NEN9 1154 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 TSTD1Q8NFU3 115 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 USP28Q96RU2 1077 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 PCIF1Q9H4Z3 704 aa10.02□□□□□ -0.81
SDC2-207ENST00000522911 COMMD8Q9NX08 183 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms