RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 GOLGA5Q8TBA6 731 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 PLEKHO2Q8TD55 490 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 SH3RF2Q8TEC5 729 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 NELL1Q92832 810 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CHFRQ96EP1 664 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 TRMT2BQ96GJ1 504 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 MYRFLQ96LU7 910 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 IER2Q9BTL4 223 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 EPC1Q9H2F5 836 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 LINC00597Q9H2U6 94 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 KIF9Q9HAQ2 790 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 FBRSL1Q9HCM7 1045 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CGNQ9P2M7 1197 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 GMEB2Q9UKD1 530 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 MAPK8IP1Q9UQF2 711 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 NME7Q9Y5B8 376 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 TSC2P49815 1807 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 CEP250Q9BV73 2442 aa10.92□□□□□ -0.66
CTNNA1-235ENST00000522730 LRRIQ3A6PVS8 624 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 TRIM66O15016 1216 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 KLRC4O43908 158 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 TACC1O75410 805 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 EGFP01133 1207 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 RPN1P04843 607 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 TDGF1P13385 188 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SYKP43405 635 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 DLG4P78352 724 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SPEM2Q0P670 501 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 ORC1Q13415 861 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 NCOA4Q13772 614 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 CCINQ13939 588 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 BMT2Q1RMZ1 405 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 ZNF699Q32M78 642 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 TDRD10Q5VZ19 366 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 FSTL4Q6MZW2 842 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 PKN3Q6P5Z2 889 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 MAMSTRQ6ZN01 415 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 LIMS2Q7Z4I7 341 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 CPA6Q8N4T0 437 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 KIAA0895Q8NCT3 520 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SPATA17Q96L03 361 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 B3GNT5Q9BYG0 378 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 ZNF518BQ9C0D4 1074 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 GZF1Q9H116 711 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SMYD3Q9H7B4 428 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 ECT2Q9H8V3 914 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SMPD4Q9NXE4 827 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SLC8A2Q9UPR5 921 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 ZDHHC9Q9Y397 364 aa10.91□□□□□ -0.66
CTNNA1-235ENST00000522730 SDK1Q7Z5N4 2213 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 K7ESF4 209 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 RNF40O75150 1001 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 NR3C1P04150 777 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 ATICP31939 592 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 GJA4P35212 333 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 NDUFA8P51970 172 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 CACNA2D1P54289 1103 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 KRT85P78386 507 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 TAF10Q12962 218 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 NR1H3Q13133 447 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 ZNF268Q14587 947 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 LONP2Q86WA8 852 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 C12orf56Q8IXR9 622 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 B3GALNT2Q8NCR0 500 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 PARD3BQ8TEW8 1205 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 OSCP1Q8WVF1 389 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 ATP2A3Q93084 1043 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 CCDC47Q96A33 483 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 P2RY13Q9BPV8 354 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 RNF38Q9H0F5 515 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 XYLT2Q9H1B5 865 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 EHD2Q9NZN4 543 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 GCNT4Q9P109 453 aa10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 CHORDC1Q9UHD1 332 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-235ENST00000522730 DCHS1Q96JQ0 3298 aa10.9□□□□□ -0.67
CTNNA1-235ENST00000522730 ATG2BQ96BY7 2078 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ZNF638Q14966 1978 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ZNF840PA6NDX5 716 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 LEFTY2O00292 366 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 TRDMT1O14717 391 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 AXIN1O15169 862 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 CALUO43852 315 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ATG13O75143 517 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 PDE6CP51160 858 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 AP3M2P53677 418 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 SEC13P55735 322 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 PUM1Q14671 1186 aaKnown RBP eCLIP10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 ZNF77Q15935 545 aa10.89□□□□□ -0.67
CTNNA1-235ENST00000522730 SGSM1Q2NKQ1 1148 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms