RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 YIPF1Q9Y548 306 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 MYH10P35580 1976 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 SOWAHDA6NJG2 315 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 HHLA1C9JL84 531 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 XPO1O14980 1071 aaKnown RBP17.19■□□□□ 0.34
LSM1-204ENST00000522515 LSM8O95777 96 aaKnown RBP17.19■□□□□ 0.34
LSM1-204ENST00000522515 C8AP07357 584 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 UNGP13051 313 aaPredicted RBP17.19■□□□□ 0.34
LSM1-204ENST00000522515 SLC8A3P57103 927 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 CLEC16AQ2KHT3 1053 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 PMF1Q6P1K2 205 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 TRIM72Q6ZMU5 477 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 PIGZQ86VD9 579 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 TMTC1Q8IUR5 882 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 TMEM35BQ8NCS4 154 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 STKLD1Q8NE28 680 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 GPR152Q8TDT2 470 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 CPA5Q8WXQ8 436 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 C8orf48Q96LL4 319 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 CCDC42Q96M95 316 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 GAS2L1Q99501 681 aaPredicted RBP17.19■□□□□ 0.34
LSM1-204ENST00000522515 CDCA3Q99618 268 aaPredicted RBP17.19■□□□□ 0.34
LSM1-204ENST00000522515 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 PLEKHA4Q9H4M7 779 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 CEP83Q9Y592 693 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 INSL5Q9Y5Q6 135 aa17.19■□□□□ 0.34
LSM1-204ENST00000522515 MTCL1Q9Y4B5 1905 aaKnown RBP17.18■□□□□ 0.34
LSM1-204ENST00000522515 TRIM66O15016 1216 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 PLA2G4AP47712 749 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 RGS7P49802 495 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 KIF11P52732 1056 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 RPL10AP62906 217 aaKnown RBP17.18■□□□□ 0.34
LSM1-204ENST00000522515 GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
LSM1-204ENST00000522515 MTF1Q14872 753 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 LIN9Q5TKA1 542 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 CCDC149Q6ZUS6 474 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 TAS2R14Q9NYV8 317 aa17.18■□□□□ 0.34
LSM1-204ENST00000522515 PRRC2BQ5JSZ5 2229 aaKnown RBP17.18■□□□□ 0.34
LSM1-204ENST00000522515 TMCO5BA8MYB1 307 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 LINC01565O15544 149 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 AKR1B10O60218 316 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 GABBR2O75899 941 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 ANXA13P27216 316 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 CENPCQ03188 943 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 TWF1Q12792 350 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 PDCLQ13371 301 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 SLC18A3Q16572 532 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 RAD9BQ6WBX8 426 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 DNAAF5Q86Y56 855 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 DEFB123Q8N688 67 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 STK32AQ8WU08 396 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 HDAC7Q8WUI4 952 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 MYLIPQ8WY64 445 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 CPXM1Q96SM3 734 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 CDX2Q99626 313 aaPredicted RBP17.17■□□□□ 0.34
LSM1-204ENST00000522515 UBXN6Q9BZV1 441 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 PNPLA8Q9NP80 782 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 ST7Q9NRC1 585 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 SPTLC3Q9NUV7 552 aa17.17■□□□□ 0.34
LSM1-204ENST00000522515 PIK3R2O00459 728 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 TNFRSF10BO14763 440 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 RFPL2O75678 378 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 ZMYND10O75800 440 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 GLP2RO95838 553 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 CCZ1BP86790 482 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
LSM1-204ENST00000522515 PTPN20Q4JDL3 420 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 EFHBQ8N7U6 833 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 PPP1R13BQ96KQ4 1090 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 SPATA17Q96L03 361 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 HSFY1Q96LI6 401 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 GUCD1Q96NT3 240 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 SLC4A5Q9BY07 1137 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 TJP2Q9UDY2 1190 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 DPP7Q9UHL4 492 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 NAGPAQ9UK23 515 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 NENFQ9UMX5 172 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 REV3LO60673 3130 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 PATJQ8NI35 1801 aa17.16■□□□□ 0.34
LSM1-204ENST00000522515 ZNF263O14978 683 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 LRG1P02750 347 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 GZMAP12544 262 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 NSFP46459 744 aaKnown RBP17.15■□□□□ 0.34
LSM1-204ENST00000522515 RPL34P49207 117 aaKnown RBP17.15■□□□□ 0.34
LSM1-204ENST00000522515 SLC5A3P53794 718 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 MTMR3Q13615 1198 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 C2CD6Q53TS8 623 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 RAB41Q5JT25 222 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 PPM1LQ5SGD2 360 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 ACAD10Q6JQN1 1059 aa17.15■□□□□ 0.34
LSM1-204ENST00000522515 ALKBH5Q6P6C2 394 aaKnown RBP17.15■□□□□ 0.34
LSM1-204ENST00000522515 ERICH1Q86X53 443 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms