RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 GRK4P32298 578 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 MSH2P43246 934 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 GATMP50440 423 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SCNN1GP51170 649 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 BPIFB4P59827 614 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 C1orf127Q8N9H9 656 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SPATA4Q8NEY3 305 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SLC35G2Q8TBE7 412 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 TWNKQ96RR1 684 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 NTPCRQ9BSD7 190 aaKnown RBP8.36□□□□□ -1.07
SPIDR-213ENST00000521214 BRD8Q9H0E9 1235 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SUN2Q9UH99 717 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 DAAM1Q9Y4D1 1078 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 TRIP11Q15643 1979 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 MAGEB2O15479 319 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 UBOX5O94941 541 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 GSTA1P08263 222 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 ITGA7Q13683 1181 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 ALCAMQ13740 583 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SMTNL2Q2TAL5 461 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 CFAP157Q5JU67 520 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 HPDLQ96IR7 371 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 LBHD1Q9BQE6 289 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SIKE1Q9BRV8 207 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 CISHQ9NSE2 258 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 PRMT7Q9NVM4 692 aaPredicted RBP8.36□□□□□ -1.07
SPIDR-213ENST00000521214 SRRDQ9UH36 339 aa8.36□□□□□ -1.07
SPIDR-213ENST00000521214 CHD7Q9P2D1 2997 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 F5H423 210 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 O00370 1275 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SEPT4O43236 478 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 F2P00734 622 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 RRM1P23921 792 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 DYNLT1P63172 113 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ABRAQ8N0Z2 381 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ARRDC4Q8NCT1 418 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 LMO3Q8TAP4 145 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 MDM1Q8TC05 714 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ADAM2Q99965 735 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 MKNK1Q9BUB5 465 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 DPP3Q9NY33 737 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 PCSK1NQ9UHG2 260 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ATP11BQ9Y2G3 1177 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 WDR37Q9Y2I8 494 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 C2CD2LO14523 706 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 NDUFB5O43674 189 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 FAM153BP0C7A2 387 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SKIP12755 728 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 GARTP22102 1010 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TNNC1P63316 161 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 MCL1Q07820 350 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 CUL2Q13617 745 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TRIP13Q15645 432 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ZACNQ401N2 412 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 FAM153CQ494X1 144 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 PPFIBP2Q8ND30 876 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 HELQQ8TDG4 1101 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 EPS8L1Q8TE68 723 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TRAPPC9Q96Q05 1148 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 RAB3IPQ96QF0 476 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 GPR88Q9GZN0 384 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 C2orf40Q9H1Z8 148 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 C17orf75Q9HAS0 396 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 CNOT8Q9UFF9 292 aaKnown RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 FAM153AQ9UHL3 310 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ZNF180Q9UJW8 692 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ANAPC7Q9UJX3 599 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 PTPN22Q9Y2R2 807 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TTC3P53804 2025 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 H0YCG3 227 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SMAPO00193 183 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 CLDN5O00501 218 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SCAMP3O14828 347 aaKnown RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 FGFR1P11362 822 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 NSFP46459 744 aaKnown RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 TM4SF4P48230 202 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 CACNA2D1P54289 1103 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 RNASELQ05823 741 aaKnown RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 MEA1Q16626 185 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ATP13A4Q4VNC1 1196 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 COBLL1Q53SF7 1204 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 KCNT1Q5JUK3 1230 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 SCYL2Q6P3W7 929 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 NUDCD1Q96RS6 583 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 MTG1Q9BT17 334 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 NUP85Q9BW27 656 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 DPEP3Q9H4B8 488 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ABCF3Q9NUQ8 709 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 DNAJC17Q9NVM6 304 aaKnown RBP8.35□□□□□ -1.07
SPIDR-213ENST00000521214 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
SPIDR-213ENST00000521214 PLXNB2O15031 1838 aa8.34□□□□□ -1.07
SPIDR-213ENST00000521214 GON4LQ3T8J9 2241 aa8.34□□□□□ -1.07
SPIDR-213ENST00000521214 DUSP11O75319 330 aaKnown RBP8.34□□□□□ -1.07
SPIDR-213ENST00000521214 KRT38O76015 456 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms