RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ACOT1Q86TX2 421 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 NPAS3Q8IXF0 933 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 TTC9BQ8N6N2 239 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 PCED1BQ96HM7 432 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 FUBP3Q96I24 572 aaKnown RBP eCLIP19.28■□□□□ 0.68
VEGFA-222ENST00000520948 NAP1L5Q96NT1 182 aaPredicted RBP19.28■□□□□ 0.68
VEGFA-222ENST00000520948 ERGIC2Q96RQ1 377 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 HINFPQ9BQA5 517 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 ABCB6Q9NP58 842 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 UBE2TQ9NPD8 197 aaPredicted RBP19.28■□□□□ 0.68
VEGFA-222ENST00000520948 PLCB1Q9NQ66 1216 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 DNMT3BQ9UBC3 853 aaKnown RBP19.28■□□□□ 0.68
VEGFA-222ENST00000520948 SIK3Q9Y2K2 1263 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 SLC27A5Q9Y2P5 690 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 INSL5Q9Y5Q6 135 aa19.28■□□□□ 0.68
VEGFA-222ENST00000520948 A0A1B0GTH6 734 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
VEGFA-222ENST00000520948 HAPLN1P10915 354 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-222ENST00000520948 CDR1P51861 262 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 YWHAEP62258 255 aaKnown RBP19.27■□□□□ 0.68
VEGFA-222ENST00000520948 MLF2Q15773 248 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-222ENST00000520948 MDH1BQ5I0G3 518 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 KLHDC7AQ5VTJ3 777 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 ENOSF1Q7L5Y1 443 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 KIAA2013Q8IYS2 634 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 SLC4A11Q8NBS3 891 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 TMEM176AQ96HP8 235 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 SHDQ96IW2 340 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 FAM81BQ96LP2 452 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 B3GNT5Q9BYG0 378 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 SEMA4AQ9H3S1 761 aa19.27■□□□□ 0.68
VEGFA-222ENST00000520948 MTF2Q9Y483 593 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-222ENST00000520948 KANSL1LA0AUZ9 987 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 GOLGA6L19H0YKK7 550 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 RNF225M0QZC1 329 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 PRRG1O14668 218 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 TEX33O43247 280 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 NOL4O94818 638 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 CD72P21854 359 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 MAGEA11P43364 429 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 TUFMP49411 452 aaKnown RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 MFAP3P55082 362 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 TPM4P67936 248 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 FANCCQ00597 558 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 UBXN1Q04323 297 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 ORC1Q13415 861 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 NR1I3Q14994 352 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 UBXN2BQ14CS0 331 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 ZC3H14Q6PJT7 736 aaKnown RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 C4orf50Q6ZRC1 276 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 ERMP1Q7Z2K6 904 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 MYLPFQ96A32 169 aa19.26■□□□□ 0.67
VEGFA-222ENST00000520948 NAA15Q9BXJ9 866 aaKnown RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 ABI2Q9NYB9 513 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 AJAP1Q9UKB5 411 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-222ENST00000520948 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 CYP2F1P24903 491 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 KLK7P49862 253 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 SLC5A9Q2M3M2 681 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 SLC44A4Q53GD3 710 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 GAS2L3Q86XJ1 694 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 MAML2Q8IZL2 1156 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-222ENST00000520948 FUKQ8N0W3 1084 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 C12orf29Q8N999 325 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 MCRS1Q96EZ8 462 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 GANQ9H2C0 597 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 SPATA6Q9NWH7 488 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-222ENST00000520948 CEP72Q9P209 647 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 DNAJC12Q9UKB3 198 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 MRPS23Q9Y3D9 190 aaKnown RBP19.25■□□□□ 0.67
VEGFA-222ENST00000520948 YIPF1Q9Y548 306 aa19.25■□□□□ 0.67
VEGFA-222ENST00000520948 RHOP08100 348 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 ATF6P18850 670 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 BDNFP23560 247 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 ZNF132P52740 706 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 SYCP1Q15431 976 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 VSTM1Q6UX27 236 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 DCLK2Q8N568 766 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 SHC3Q92529 594 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 RMDN1Q96DB5 314 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 HNRNPABQ99729 332 aaKnown RBP19.24■□□□□ 0.67
VEGFA-222ENST00000520948 DDX23Q9BUQ8 820 aaKnown RBP19.24■□□□□ 0.67
VEGFA-222ENST00000520948 LSM14BQ9BX40 385 aaKnown RBP19.24■□□□□ 0.67
VEGFA-222ENST00000520948 TMEM30AQ9NV96 361 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 PCDHB4Q9Y5E5 795 aa19.24■□□□□ 0.67
VEGFA-222ENST00000520948 FAM170BA6NMN3 283 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 CLDN5O00501 218 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 SOAT2O75908 522 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 LRG1P02750 347 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 PAEPP09466 180 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 UCHL3P15374 230 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 CEBPBP17676 345 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 CYP27A1Q02318 531 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 PRKCQQ04759 706 aa19.23■□□□□ 0.67
VEGFA-222ENST00000520948 TWF1Q12792 350 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms