RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RTP3Q9BQQ7 232 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SMARCAL1Q9NZC9 954 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TTC7AQ9ULT0 858 aaPredicted RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAN1Q9Y2M0 1017 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PTPRSQ13332 1948 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 F8VP50 259 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CCDC188H7C350 402 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PAPSS1O43252 624 aaPredicted RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 AP1G2O75843 785 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RNF8O76064 485 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FGGP02679 453 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 AMHP03971 560 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PYGMP11217 842 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LCP1P13796 627 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CSF2RAP15509 400 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DESP17661 470 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GPD1P21695 349 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GJC1P36383 396 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SCNN1AP37088 669 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RPL34P49207 117 aaKnown RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC11A1P49279 550 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF143P52747 638 aaPredicted RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TAS2R40P59535 323 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ELAVL2Q12926 359 aaKnown RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ACAP1Q15027 740 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LONRF2Q1L5Z9 754 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM171A1Q5VUB5 890 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DAB2IPQ5VWQ8 1189 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM171BQ6P995 826 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OLFML1Q6UWY5 402 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CLEC20AQ6ZU45 233 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PAQR9Q6ZVX9 377 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KATNAL2Q8IYT4 538 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SIX6OS1Q8N1H7 587 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MMGT1Q8N4V1 131 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 EMC1Q8N766 993 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OR10T2Q8NGX3 314 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KCTD13Q8WZ19 329 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TRIM43Q96BQ3 446 aaPredicted RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CNPY3Q9BT09 278 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MCOLN1Q9GZU1 580 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LRRC4Q9HBW1 653 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PRDM10Q9NQV6 1147 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MARCH5Q9NX47 278 aa8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SF3B1O75533 1304 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MYO16Q9Y6X6 1858 aa8.02□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KIAA1671Q9BY89 1806 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GOLGA6L10A0A0M3HER8 536 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 C2CD4BA6NLJ0 364 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 KRIT1O00522 736 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GRAP2O75791 330 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GABBR2O75899 941 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DGKIO75912 1065 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BEST1O76090 585 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 OAZ2O95190 189 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZRANB2O95218 330 aaKnown RBP eCLIP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TUBBP07437 444 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 GALTP07902 379 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RHOXF2BP0C7M4 288 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PDGFRAP16234 1089 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ITGB8P26012 769 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SDC4P31431 198 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 CETN2P41208 172 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 BCAR1P56945 870 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 MAP3K7CLP57077 242 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ADIGQ0VDE8 80 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SMC1AQ14683 1233 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 HADHQ16836 314 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ODF2Q5BJF6 829 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 EFHC1Q5JVL4 640 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 VARS2Q5ST30 1063 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZFYVE27Q5T4F4 411 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 LRRC38Q5VT99 294 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ZNF280DQ6N043 979 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 C4orf50Q6ZRC1 276 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SLC26A9Q7LBE3 791 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 SPATA2LQ8IUW3 424 aaPredicted RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DCP1BQ8IZD4 617 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 EXD1Q8NHP7 514 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RXFP2Q8WXD0 754 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 TOP1MTQ969P6 601 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 VWCEQ96DN2 955 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PIWIL1Q96J94 861 aaKnown RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 PKMYT1Q99640 499 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 NCAPGQ9BPX3 1015 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 RHOXF2Q9BQY4 288 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 UBXN6Q9BZV1 441 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 DMAP1Q9NPF5 467 aaPredicted RBP8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 IL23AQ9NPF7 189 aa8.02□□□□□ -1.13
SCARNA20.1-201ENST00000516009 ASNSD1Q9NWL6 643 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms