RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 SMTNP53814 917 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 SLC14A1Q13336 389 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 TRIM29Q14134 588 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 JADE1Q6IE81 842 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 CD302Q8IX05 232 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 OR2I1PQ8NGU4 316 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 MDM1Q8TC05 714 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 SH3RF2Q8TEC5 729 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 MYRFLQ96LU7 910 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 CCSER1Q9C0I3 900 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 RPF1Q9H9Y2 349 aaKnown RBP9.68□□□□□ -0.86
CAST-239ENST00000513666 TRPC7Q9HCX4 862 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 TMLHEQ9NVH6 421 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 GCNT4Q9P109 453 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 DKK4Q9UBT3 224 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 DNM3Q9UQ16 869 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 URB1O60287 2271 aaKnown RBP9.68□□□□□ -0.86
CAST-239ENST00000513666 ASXL3Q9C0F0 2248 aa9.68□□□□□ -0.86
CAST-239ENST00000513666 OGTO15294 1046 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 SH3BP5O60239 455 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 GJB3O75712 270 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 NFICP08651 508 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 PLS3P13797 630 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 RPL10AP62906 217 aaKnown RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 PDIA5Q14554 519 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 ZC2HC1CQ53FD0 456 aaPredicted RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 SDHAF4Q5VUM1 108 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 WSCD1Q658N2 575 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 ARL14EPQ8N8R7 260 aaPredicted RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 PNPLA1Q8N8W4 532 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 BICD1Q96G01 975 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 CAMK1GQ96NX5 476 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 PYM1Q9BRP8 204 aaKnown RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 PI4K2AQ9BTU6 479 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 ARHGAP26Q9UNA1 814 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 APOBEC2Q9Y235 224 aaKnown RBP9.67□□□□□ -0.86
CAST-239ENST00000513666 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 KALRNO60229 2985 aa9.67□□□□□ -0.86
CAST-239ENST00000513666 TCRBV21S2A2A0A5A6 115 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 MYMKA6NI61 221 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 CYP17A1P05093 508 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 SYPP08247 313 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 CDC25AP30304 524 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 KIR2DL1P43626 348 aaPredicted RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 TAF6P49848 677 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 RPL6Q02878 288 aaKnown RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 ZNF33AQ06730 810 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 C19orf57Q0VDD7 668 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 TMEM132DQ14C87 1099 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 SAFBQ15424 915 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAST-239ENST00000513666 NFE2Q16621 373 aaPredicted RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 DDR2Q16832 855 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 SLC36A4Q6YBV0 504 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 TOGARAM2Q6ZUX3 1019 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 NAXDQ8IW45 347 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 SFTPA1Q8IWL2 248 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 C4orf32Q8N8J7 132 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 IGSF22Q8N9C0 903 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 SPATA18Q8TC71 538 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 LEO1Q8WVC0 666 aaPredicted RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 YTHDC1Q96MU7 727 aaKnown RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 ABCB6Q9NP58 842 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 DERAQ9Y315 318 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 A0A0A0MRY4 1105 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 H0YCG3 227 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 ADAM23O75077 832 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 KAT7O95251 611 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 APODP05090 189 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 CYP2F1P24903 491 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 EIF2DP41214 584 aaKnown RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 LIG4P49917 911 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 TSPY1Q01534 308 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 MESP2Q0VG99 397 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 KCNB1Q14721 858 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 TTC38Q5R3I4 469 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 CENPQQ7L2Z9 268 aaPredicted RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 KCNK18Q7Z418 384 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 GLRX5Q86SX6 157 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 DEFB119Q8N690 84 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 KIAA1958Q8N8K9 716 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 NECAB1Q8N987 351 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 FSIP1Q8NA03 581 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 NSUN7Q8NE18 718 aaKnown RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 KCNN1Q92952 543 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 GTF3C6Q969F1 213 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 PNKPQ96T60 521 aa9.66□□□□□ -0.86
CAST-239ENST00000513666 CPSF3Q9UKF6 684 aaKnown RBP9.66□□□□□ -0.86
CAST-239ENST00000513666 TENM4Q6N022 2769 aa9.65□□□□□ -0.86
CAST-239ENST00000513666 MYO18AQ92614 2054 aaKnown RBP9.65□□□□□ -0.86
CAST-239ENST00000513666 A0A0B4J269 797 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms