RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 PEAR1Q5VY43 1037 aaPredicted RBP6.83□□□□□ -1.32
SRPK1-213ENST00000513367 FSTL4Q6MZW2 842 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 PDZD4Q76G19 769 aaPredicted RBP6.83□□□□□ -1.32
SRPK1-213ENST00000513367 RHPN2Q8IUC4 686 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 EDEM1Q92611 657 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 PMEPA1Q969W9 287 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 RELTQ969Z4 430 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 PGBD1Q96JS3 809 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 TMEM209Q96SK2 561 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 PAAF1Q9BRP4 392 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 TRIM56Q9BRZ2 755 aaKnown RBP6.83□□□□□ -1.32
SRPK1-213ENST00000513367 TRPV4Q9HBA0 871 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 UBN1Q9NPG3 1134 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 NRBP2Q9NSY0 501 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 AGPAT5Q9NUQ2 364 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 APOBEC2Q9Y235 224 aaKnown RBP6.83□□□□□ -1.32
SRPK1-213ENST00000513367 HES2Q9Y543 173 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 PTPRDP23468 1912 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 MYO16Q9Y6X6 1858 aa6.83□□□□□ -1.32
SRPK1-213ENST00000513367 CREBBPQ92793 2442 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 SF3B1O75533 1304 aaKnown RBP eCLIP6.82□□□□□ -1.324e-9■■■■■ 60.3
SRPK1-213ENST00000513367 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 MEIS1O00470 390 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 SLC28A2O43868 658 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 EGFP01133 1207 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 CYP11A1P05108 521 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 MYL4P12829 197 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 HOXA11P31270 313 aaPredicted RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 PCDH1Q08174 1060 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 FCHO2Q0JRZ9 810 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 HSP90AA2PQ14568 343 aaPredicted RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 CEP55Q53EZ4 464 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 CYP4A22Q5TCH4 519 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 RTL10Q7L3V2 364 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 TMPRSS7Q7RTY8 843 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 GPR155Q7Z3F1 870 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 C11orf74Q86VG3 221 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 MINDY1Q8N5J2 469 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 ZNF513Q8N8E2 541 aaPredicted RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 OTUD7AQ8TE49 926 aaPredicted RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 RRP36Q96EU6 259 aaKnown RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 FAM167AQ96KS9 214 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 NLRP4Q96MN2 994 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 LRRC3BQ96PB8 259 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 EIF2AQ9BY44 585 aaKnown RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 SEMA4CQ9C0C4 833 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 SLITRK6Q9H5Y7 841 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 ZBTB40Q9NUA8 1239 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 SUCLA2Q9P2R7 463 aaPredicted RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 EBF1Q9UH73 591 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 IPPQ9Y573 584 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 CDY1Q9Y6F8 540 aa6.82□□□□□ -1.32
SRPK1-213ENST00000513367 HELZP42694 1942 aaKnown RBP6.82□□□□□ -1.32
SRPK1-213ENST00000513367 TTC41PQ6P2S7 1318 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 FLNCQ14315 2725 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 KIAA1549LQ6ZVL6 1849 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 PCDH15Q96QU1 1955 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 TEX51A0A1B0GUA7 166 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 FAM149AA5PLN7 773 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 PRRG1O14668 218 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 KRT10P13645 584 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 ITIH2P19823 946 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 ELF1P32519 619 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 ZNF76P36508 570 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 PTGER3P43115 390 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 CSRP3P50461 194 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 DNM2P50570 870 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 CDC42EP1Q00587 391 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 GFPT1Q06210 699 aaPredicted RBP6.81□□□□□ -1.32
SRPK1-213ENST00000513367 SPIRE1Q08AE8 756 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 GRSF1Q12849 480 aaKnown RBP eCLIP6.81□□□□□ -1.32
SRPK1-213ENST00000513367 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
SRPK1-213ENST00000513367 DMC1Q14565 340 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 TEAD2Q15562 447 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 TMEM196Q5HYL7 178 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 CYB5R4Q7L1T6 521 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 HAUS6Q7Z4H7 955 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 ZNF410Q86VK4 478 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 SYT12Q8IV01 421 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 FMNL3Q8IVF7 1028 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 RPLP0P6Q8NHW5 317 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 E2F7Q96AV8 911 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 DIRC2Q96SL1 478 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 SH2D3AQ9BRG2 576 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 MINDY3Q9H8M7 445 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 IFT122Q9HBG6 1241 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 FBRSL1Q9HCM7 1045 aaKnown RBP6.81□□□□□ -1.32
SRPK1-213ENST00000513367 SEC63Q9UGP8 760 aaKnown RBP6.81□□□□□ -1.32
SRPK1-213ENST00000513367 SAMM50Q9Y512 469 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 PCDHA10Q9Y5I2 948 aa6.81□□□□□ -1.32
SRPK1-213ENST00000513367 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
SRPK1-213ENST00000513367 hCG_1642624A0A1W2PR95 340 aa6.8□□□□□ -1.32
SRPK1-213ENST00000513367 TMEM150BA6NC51 233 aa6.8□□□□□ -1.32
SRPK1-213ENST00000513367 CASTOR2A6NHX0 329 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms