RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
SKP2-207ENST00000513263 ADH1CP00326 375 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 EGFP01133 1207 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 ARSAP15289 507 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 TNNI1P19237 187 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 ATICP31939 592 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 MPLP40238 635 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 GPR15P49685 360 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 ASIC1P78348 528 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 SLC7A9P82251 487 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 DMC1Q14565 340 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 USP39Q53GS9 565 aaKnown RBP11.71□□□□□ -0.53
SKP2-207ENST00000513263 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 PDILTQ8N807 584 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 TSTD1Q8NFU3 115 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 SH3RF2Q8TEC5 729 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 SYAP1Q96A49 352 aaPredicted RBP11.71□□□□□ -0.53
SKP2-207ENST00000513263 OTUB2Q96DC9 234 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 C8orf48Q96LL4 319 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 CGRRF1Q99675 332 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 TRIM9Q9C026 710 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 ARRDC1-AS1Q9H2J1 176 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 PCIF1Q9H4Z3 704 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.53
SKP2-207ENST00000513263 CHD6Q8TD26 2715 aa11.71□□□□□ -0.54
SKP2-207ENST00000513263 OTOL1A6NHN0 477 aaPredicted RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 CUTAO60888 179 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 OLFM2O95897 454 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 P4HA1P13674 534 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 GALK1P51570 392 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 DGKEP52429 567 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 PSMD2Q13200 908 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 SRSF5Q13243 272 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 TRPC3Q13507 836 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 BYSLQ13895 437 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 PSMD6Q15008 389 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 SDHAF4Q5VUM1 108 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 TDRD10Q5VZ19 366 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 TRAPPC11Q7Z392 1133 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 TRMT11Q7Z4G4 463 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 KBTBD6Q86V97 674 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 OSTM1Q86WC4 334 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 C12orf56Q8IXR9 622 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 ARL14EPQ8N8R7 260 aaPredicted RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 XXYLT1Q8NBI6 393 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 ZNF507Q8TCN5 953 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 KBTBD7Q8WVZ9 684 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 PCED1BQ96HM7 432 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 TNIP3Q96KP6 325 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 CNOT6LQ96LI5 555 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 HHIPQ96QV1 700 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
SKP2-207ENST00000513263 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 GCNT4Q9P109 453 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 MTMR6Q9Y217 621 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 CFAP47Q6ZTR5 3102 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
SKP2-207ENST00000513263 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
SKP2-207ENST00000513263 BDNFP23560 247 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 GNL1P36915 607 aaPredicted RBP11.69□□□□□ -0.54
SKP2-207ENST00000513263 TUBP50607 506 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 WNT7BP56706 349 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
SKP2-207ENST00000513263 CYP24A1Q07973 514 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 E2F4Q16254 413 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 BMT2Q1RMZ1 405 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 PLK5Q496M5 336 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 RNF43Q68DV7 783 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 UNC13DQ70J99 1090 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
SKP2-207ENST00000513263 TTC16Q8NEE8 873 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 CHFRQ96EP1 664 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 IKZF4Q9H2S9 585 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 C2orf42Q9NWW7 574 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 FAM13BQ9NYF5 915 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 ANGPTL2Q9UKU9 493 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 MMP17Q9ULZ9 603 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 WNT6Q9Y6F9 365 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 GON4LQ3T8J9 2241 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 ASCC3Q8N3C0 2202 aaKnown RBP11.69□□□□□ -0.54
SKP2-207ENST00000513263 ASPMQ8IZT6 3477 aa11.69□□□□□ -0.54
SKP2-207ENST00000513263 PTPRJQ12913 1337 aa11.68□□□□□ -0.54
SKP2-207ENST00000513263 A0A087X0B3 334 aa11.68□□□□□ -0.54
SKP2-207ENST00000513263 PVALEFA0A1B0GWK0 134 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms