RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 PCDHA12Q9UN75 941 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 PCNX2A6NKB5 2137 aa13.36□□□□□ -0.27
SDHA-215ENST00000512962 ASH1LQ9NR48 2969 aaKnown RBP13.35□□□□□ -0.27
SDHA-215ENST00000512962 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 TRDMT1O14717 391 aaKnown RBP13.35□□□□□ -0.27
SDHA-215ENST00000512962 ATXN7O15265 892 aaPredicted RBP13.35□□□□□ -0.27
SDHA-215ENST00000512962 EFSO43281 561 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 KCNE1P15382 129 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 TXKP42681 527 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 NAMPTP43490 491 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 LAPTM4AQ15012 233 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.35□□□□□ -0.27
SDHA-215ENST00000512962 FIGNL1Q6PIW4 674 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 DNAJB7Q7Z6W7 309 aaPredicted RBP13.35□□□□□ -0.27
SDHA-215ENST00000512962 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 ATAD1Q8NBU5 361 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 MCPH1Q8NEM0 835 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 RPLP0P6Q8NHW5 317 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 DEPTORQ8TB45 409 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 FRMD6Q96NE9 622 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 SLC46A2Q9BY10 475 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SDHA-215ENST00000512962 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 SCAMP3O14828 347 aaKnown RBP13.34□□□□□ -0.27
SDHA-215ENST00000512962 ATF6P18850 670 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 GBP1P32455 592 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 MCM2P49736 904 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 SPAG1Q07617 926 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
SDHA-215ENST00000512962 ELF2Q15723 593 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 CALCRLQ16602 461 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 COL28A1Q2UY09 1125 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 ZNF568Q3ZCX4 644 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 CENPPQ6IPU0 288 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 PDZD3Q86UT5 571 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 CAMKK1Q8N5S9 505 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 EPS8L3Q8TE67 593 aaKnown RBP13.34□□□□□ -0.27
SDHA-215ENST00000512962 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
SDHA-215ENST00000512962 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 ABI2Q9NYB9 513 aaPredicted RBP13.34□□□□□ -0.27
SDHA-215ENST00000512962 PCDHGC4Q9Y5F7 938 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 CEP192Q8TEP8 1941 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 PLXND1Q9Y4D7 1925 aa13.34□□□□□ -0.27
SDHA-215ENST00000512962 PI4KAP42356 2102 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 M0QZQ0 153 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 PPEF2O14830 753 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 BAG4O95429 457 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 LARGE1O95461 756 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 HNRNPLP14866 589 aaKnown RBP eCLIP13.33□□□□□ -0.28
SDHA-215ENST00000512962 CYP11B2P19099 503 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 NMT1P30419 496 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 GALK1P51570 392 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 GUCY2FP51841 1108 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 RUNX3Q13761 415 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 DMC1Q14565 340 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 HAUS6Q7Z4H7 955 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 FRMD1Q8N878 549 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 STKLD1Q8NE28 680 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 ZBTB45Q96K62 511 aaPredicted RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 TARS2Q9BW92 718 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 TMEM74BQ9NUR3 256 aa13.33□□□□□ -0.28
SDHA-215ENST00000512962 HELZP42694 1942 aaKnown RBP13.33□□□□□ -0.28
SDHA-215ENST00000512962 CPLX1O14810 134 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 ATG13O75143 517 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 OAZ2O95190 189 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 CTDNEP1O95476 244 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 APBB3O95704 486 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
SDHA-215ENST00000512962 XRCC6P12956 609 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDHA-215ENST00000512962 PROZP22891 400 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 DGKEP52429 567 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 EPHB3P54753 998 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
SDHA-215ENST00000512962 SCRN1Q12765 414 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDHA-215ENST00000512962 GPR17Q13304 367 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 PLD1Q13393 1074 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 SYT13Q7L8C5 426 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 PIP4P1Q86T03 277 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
SDHA-215ENST00000512962 USP13Q92995 863 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms