RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TTC36A6NLP5 189 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 CD48P09326 243 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 STAT4Q14765 748 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 MUM1Q2TAK8 710 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 TRPM8Q7Z2W7 1104 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 WDR49Q8IV35 697 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 CCHCR1Q8TD31 782 aa12.47□□□□□ -0.41
PRDM16-207ENST00000512462 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 DDX56Q9NY93 547 aaKnown RBP12.47□□□□□ -0.41
PRDM16-207ENST00000512462 PTPRJQ12913 1337 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 TRIM49D1C9J1S8 452 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 CIB2O75838 187 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 B3GAT3O94766 335 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 MICAL2O94851 1124 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 UBOX5O94941 541 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 POU5F1BQ06416 359 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 LAMC2Q13753 1193 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 MYBPC2Q14324 1141 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 PCSK7Q16549 785 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 DUPD1Q68J44 220 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 ARMC2Q8NEN0 867 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 ZFP69BQ9UJL9 534 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 M0QYT0 321 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 ACKR2O00590 384 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 POMCP01189 267 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 NCAM1P13591 858 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 SOX11P35716 441 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 WNT7BP56706 349 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 GRIK4Q16099 956 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 DGKDQ16760 1214 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 ZNF662Q6ZS27 426 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 CCNYL1Q8N7R7 359 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 TFAP2BQ92481 460 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 IFT122Q9HBG6 1241 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 SLCO1B3Q9NPD5 702 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 FAM53CQ9NYF3 392 aa12.46□□□□□ -0.41
PRDM16-207ENST00000512462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRDM16-207ENST00000512462 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
PRDM16-207ENST00000512462 ATRNL1Q5VV63 1379 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 DIAPH2O60879 1101 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 ZC3H12AQ5D1E8 599 aaKnown RBP12.46□□□□□ -0.42
PRDM16-207ENST00000512462 ZNF677Q86XU0 584 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 PPFIBP2Q8ND30 876 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 RNF139Q8WU17 664 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 C18orf25Q96B23 403 aaPredicted RBP12.46□□□□□ -0.42
PRDM16-207ENST00000512462 SGF29Q96ES7 293 aa12.46□□□□□ -0.42
PRDM16-207ENST00000512462 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.42
PRDM16-207ENST00000512462 MYO18AQ92614 2054 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 NEMP1O14524 444 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 UPP2O95045 317 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 RASSF2P50749 326 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 CAV1Q03135 178 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 PTPN20Q4JDL3 420 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SH3PXD2AQ5TCZ1 1133 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 NUDCD3Q8IVD9 361 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 CPXM1Q96SM3 734 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 TRIM55Q9BYV6 548 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 R3HDMLQ9H3Y0 253 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SLC40A1Q9NP59 571 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 MAPK13O15264 365 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 PDHA1P08559 390 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 TYK2P29597 1187 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ELK3P41970 407 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ALDH18A1P54886 795 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 UBAP2Q5T6F2 1119 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 CELF6Q96J87 481 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 TEPSINQ96N21 525 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 MINDY3Q9H8M7 445 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ABCF3Q9NUQ8 709 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 HMGXB4Q9UGU5 601 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 A0A0B4J269 797 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 LOC100653049A0A140TA62 436 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 GPR25O00155 361 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 MAGEB2O15479 319 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 KRT34O76011 436 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 AMPD1P23109 780 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 AP3M2P53677 418 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SLC12A1Q13621 1099 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 EFTUD2Q15029 972 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRDM16-207ENST00000512462 ARMC3Q5W041 872 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 NDUFAF2Q8N183 169 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 EXD1Q8NHP7 514 aa12.45□□□□□ -0.42
PRDM16-207ENST00000512462 SLC2A14Q8TDB8 520 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms