RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DCLK2Q8N568 766 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 PJA1Q8NG27 643 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 RIN3Q8TB24 985 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 PIGOQ8TEQ8 1089 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 HDAC7Q8WUI4 952 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 HSD17B14Q9BPX1 270 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 COLEC11Q9BWP8 271 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 TM6SF1Q9BZW5 370 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 POLR3FQ9H1D9 316 aaPredicted RBP7.33□□□□□ -1.24
COPS4-209ENST00000511653 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 SLC2A4RGQ9NR83 387 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 SIRPGQ9P1W8 387 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 FNIP2Q9P278 1114 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 TPCN1Q9ULQ1 816 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 ANK1P16157 1881 aa7.33□□□□□ -1.24
COPS4-209ENST00000511653 SF3B1O75533 1304 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS4-209ENST00000511653 FAM208BQ5VWN6 2430 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 A0A1B0GUA9 196 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 PTGESO14684 152 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 CCL16O15467 120 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 MARCH6O60337 910 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TADA2AO75478 443 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 LYPLA2O95372 231 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 LARGE1O95461 756 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 GPC5P78333 572 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TUSC3Q13454 348 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TFDP1Q14186 410 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 PCBP1Q15365 356 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS4-209ENST00000511653 NAB2Q15742 525 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 DCLRE1AQ6PJP8 1040 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 MAEAQ7L5Y9 396 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 C1orf210Q8IVY1 113 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 ITFG1Q8TB96 612 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 LNX1Q8TBB1 728 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 KLHL6Q8WZ60 621 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 SRPK1Q96SB4 655 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 CLSTN3Q9BQT9 956 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 NFKBIZQ9BYH8 718 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS4-209ENST00000511653 PDRG1Q9NUG6 133 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 HCFC1R1Q9NWW0 138 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.32□□□□□ -1.24
COPS4-209ENST00000511653 DPP7Q9UHL4 492 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 MAPK8IP1Q9UQF2 711 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 SIT1Q9Y3P8 196 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 ZMYM2Q9UBW7 1377 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 ATG2BQ96BY7 2078 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 LRRIQ4A6NIV6 560 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 PIK3R2O00459 728 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 PFKFB2O60825 505 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 RECQL4O94761 1208 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 C1RP00736 705 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 C8AP07357 584 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 NFICP08651 508 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 FDPSP14324 419 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 NRG1Q02297 640 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 POU5F1BQ06416 359 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 PSMD5Q16401 504 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 CALCRLQ16602 461 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 FAM171A1Q5VUB5 890 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 SLC6A19Q695T7 634 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 CDCA2Q69YH5 1023 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 GPR65Q8IYL9 337 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 SLFN12Q8IYM2 578 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TAB3Q8N5C8 712 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 C19orf47Q8N9M1 422 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 ING5Q8WYH8 240 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 FGF13Q92913 245 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 CCDC43Q96MW1 224 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 DEPDC7Q96QD5 511 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TTPALQ9BTX7 342 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TMEM60Q9H2L4 133 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 PDZD7Q9H5P4 517 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 TTC12Q9H892 705 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 ANKEF1Q9NU02 776 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 ORC3Q9UBD5 711 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
COPS4-209ENST00000511653 R3HCC1Q9Y3T6 440 aaKnown RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 MTF2Q9Y483 593 aaPredicted RBP7.32□□□□□ -1.24
COPS4-209ENST00000511653 AKAP13Q12802 2813 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 KIF26AQ9ULI4 1882 aaPredicted RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 ATRXP46100 2492 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 DSPP15924 2871 aaKnown RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 CDKL5O76039 1030 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 CD72P21854 359 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 KRT2P35908 639 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 TXKP42681 527 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 STARD6P59095 220 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 CREMQ03060 361 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 NCBP1Q09161 790 aaKnown RBP7.31□□□□□ -1.24
COPS4-209ENST00000511653 LIN9Q5TKA1 542 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 EEF1DP3Q658K8 133 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 ARMCX6Q7L4S7 300 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 CEP57Q86XR8 500 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 NOSTRINQ8IVI9 506 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 HACE1Q8IYU2 909 aa7.31□□□□□ -1.24
COPS4-209ENST00000511653 NECAB1Q8N987 351 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms