RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PCDHGA7Q9Y5G6 932 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHGA6Q9Y5G7 932 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PCDHGA3Q9Y5H0 932 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 PDE4DIPQ5VU43 2346 aa8.41□□□□□ -1.06
USP53-206ENST00000510737 UBR3Q6ZT12 1888 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 KDM6AO15550 1401 aaPredicted RBP8.4□□□□□ -1.06
USP53-206ENST00000510737 CENPJQ9HC77 1338 aaPredicted RBP8.4□□□□□ -1.06
USP53-206ENST00000510737 WDR91A4D1P6 747 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 TFF2Q03403 129 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 TLE1Q04724 770 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 MICALCLQ6ZW33 695 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 MIGA2Q7L4E1 593 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 SLC17A8Q8NDX2 589 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 C1orf162Q8NEQ5 155 aaPredicted RBP8.4□□□□□ -1.06
USP53-206ENST00000510737 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 PIGBQ92521 554 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 SNX19Q92543 992 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
USP53-206ENST00000510737 NEU2Q9Y3R4 380 aa8.4□□□□□ -1.06
USP53-206ENST00000510737 ADGRA2Q96PE1 1338 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 TOR1BO14657 336 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 GYS1P13807 737 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 TAPT1Q6NXT6 567 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 SSH1Q8WYL5 1049 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 KAT5Q92993 513 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 HDAC10Q969S8 669 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 MRPS18AQ9NVS2 196 aaKnown RBP8.39□□□□□ -1.07
USP53-206ENST00000510737 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
USP53-206ENST00000510737 THSD7BQ9C0I4 1608 aa8.39□□□□□ -1.07
USP53-206ENST00000510737 TIAM2Q8IVF5 1701 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 SGTAO43765 313 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 RHOP08100 348 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
USP53-206ENST00000510737 KRTAP10-9P60411 292 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 MAP2K1Q02750 393 aaPredicted RBP8.38□□□□□ -1.07
USP53-206ENST00000510737 HLXQ14774 488 aaPredicted RBP8.38□□□□□ -1.07
USP53-206ENST00000510737 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
USP53-206ENST00000510737 FCRLBQ6BAA4 426 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 PGM2L1Q6PCE3 622 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 RASAL3Q86YV0 1011 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 MEGF6O75095 1541 aa8.38□□□□□ -1.07
USP53-206ENST00000510737 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
USP53-206ENST00000510737 SBF1O95248 1867 aa8.37□□□□□ -1.07
USP53-206ENST00000510737 ORC4O43929 436 aa8.37□□□□□ -1.07
USP53-206ENST00000510737 POU6F2P78424 691 aaPredicted RBP8.37□□□□□ -1.07
USP53-206ENST00000510737 CLPTM1LQ96KA5 538 aa8.37□□□□□ -1.07
USP53-206ENST00000510737 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
USP53-206ENST00000510737 WNT6Q9Y6F9 365 aa8.37□□□□□ -1.07
USP53-206ENST00000510737 KAT6AQ92794 2004 aa8.37□□□□□ -1.07
USP53-206ENST00000510737 CCDC154A6NI56 674 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 MT-CO1P00395 513 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 PRKCGP05129 697 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 ITGB6P18564 788 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 ZNF425Q6IV72 752 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 POC1BQ8TC44 478 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 TRIB1Q96RU8 372 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 KLC4Q9NSK0 619 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.36□□□□□ -1.07
USP53-206ENST00000510737 SERPINB13Q9UIV8 391 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 ASAP1Q9ULH1 1129 aa8.36□□□□□ -1.07
USP53-206ENST00000510737 LTBP1Q14766 1721 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 FZD9O00144 591 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 DDNO94850 711 aaPredicted RBP8.35□□□□□ -1.07
USP53-206ENST00000510737 HOXC9P31274 260 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 NPTX2P47972 431 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 SOX10P56693 466 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 DDR1Q08345 913 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 RAB39AQ14964 217 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 ACAP2Q15057 778 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 DDX42Q86XP3 938 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP53-206ENST00000510737 B3GALNT2Q8NCR0 500 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 RFKQ969G6 155 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 HAPLN3Q96S86 360 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 SMOC2Q9H3U7 446 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 SLC5A4Q9NY91 659 aa8.35□□□□□ -1.07
USP53-206ENST00000510737 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 FAM208AQ9UK61 1670 aaKnown RBP8.34□□□□□ -1.07
USP53-206ENST00000510737 PRSS29PA6NIE9 313 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 E7ENX8 843 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 RFC4P35249 363 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 TAP2Q03519 686 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 ITIH3Q06033 890 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 ZNF782Q6ZMW2 699 aaPredicted RBP8.34□□□□□ -1.07
USP53-206ENST00000510737 COA7Q96BR5 231 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 FAXDC2Q96IV6 333 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 MKS1Q9NXB0 559 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 SERGEFQ9UGK8 458 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 SBNO2Q9Y2G9 1366 aa8.34□□□□□ -1.07
USP53-206ENST00000510737 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 PCSK6P29122 969 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 NXPH1P58417 271 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 PIGFQ07326 219 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 SLC30A10Q6XR72 485 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 Q8N9P0 234 aaPredicted RBP8.33□□□□□ -1.08
USP53-206ENST00000510737 RAPGEF4Q8WZA2 1011 aa8.33□□□□□ -1.08
USP53-206ENST00000510737 VRK1Q99986 396 aaPredicted RBP8.33□□□□□ -1.08
USP53-206ENST00000510737 PUS7LQ9H0K6 701 aaKnown RBP8.33□□□□□ -1.08
USP53-206ENST00000510737 ETAA1Q9NY74 926 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms