RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 HAPLN1P10915 354 aaPredicted RBP11.67□□□□□ -0.54
SNF8-207ENST00000509995 PPP2R5AQ15172 486 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 NECTIN1Q15223 517 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 HES3Q5TGS1 186 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 SPPL2BQ8TCT7 592 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 C2orf15Q8WU43 125 aaKnown RBP11.67□□□□□ -0.54
SNF8-207ENST00000509995 SNRNP27Q8WVK2 155 aaKnown RBP11.67□□□□□ -0.54
SNF8-207ENST00000509995 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 LSG1Q9H089 658 aaKnown RBP11.67□□□□□ -0.54
SNF8-207ENST00000509995 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 CD248Q9HCU0 757 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 PAXBP1Q9Y5B6 917 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 FBN2P35556 2912 aa11.67□□□□□ -0.54
SNF8-207ENST00000509995 UTP20O75691 2785 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 ZBTB24O43167 697 aaPredicted RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 CCNT1O60563 726 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 CSH1P0DML2 217 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 CSH2P0DML3 217 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 ODC1P11926 461 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■■■ 27.1
SNF8-207ENST00000509995 NCAM1P13591 858 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 PCBP4P57723 403 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 SERINC3Q13530 473 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 DHCR24Q15392 516 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 SF3A1Q15459 793 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 NPY5RQ15761 445 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 NTRK3Q16288 839 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 SLC10A6Q3KNW5 377 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 SLFN12Q8IYM2 578 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 PHTF2Q8N3S3 785 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 ARL14EPQ8N8R7 260 aaPredicted RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 NAF1Q96HR8 494 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 ACO2Q99798 780 aaKnown RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 TTC12Q9H892 705 aaPredicted RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 ABI2Q9NYB9 513 aaPredicted RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 GCNT4Q9P109 453 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 UXTQ9UBK9 157 aaPredicted RBP11.66□□□□□ -0.54
SNF8-207ENST00000509995 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 SRPK3Q9UPE1 567 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 TCHHQ07283 1943 aa11.66□□□□□ -0.54
SNF8-207ENST00000509995 A0A1B0GVT2 93 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.65□□□□□ -0.54
SNF8-207ENST00000509995 BTBD18B2RXH4 712 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 ABLIM1O14639 778 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 TRIM66O15016 1216 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 RFPL3O75679 317 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 MCF2P10911 925 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 CDK4P11802 303 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 CD6P30203 668 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 NTSR1P30989 418 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 GPR15P49685 360 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 SMARCB1Q12824 385 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
SNF8-207ENST00000509995 KCNB1Q14721 858 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 INAVAQ3KP66 663 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
SNF8-207ENST00000509995 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.54
SNF8-207ENST00000509995 TRMT2BQ96GJ1 504 aaKnown RBP11.65□□□□□ -0.54
SNF8-207ENST00000509995 PHLPP2Q6ZVD8 1323 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 SCN1AP35498 2009 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 C2orf78A6NCI8 922 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 K7ERI5 159 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 ADH1CP00326 375 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 C1SP09871 688 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 CR2P20023 1033 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 PROZP22891 400 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 TNFSF9P41273 254 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 WASP42768 502 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 CCT8P50990 548 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 ZXDBP98169 803 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 VAC14Q08AM6 782 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 KIF19Q2TAC6 998 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 DCAF12L1Q5VU92 463 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 PADI6Q6TGC4 694 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 MIB1Q86YT6 1006 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 ADGRG2Q8IZP9 1017 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 CADM4Q8NFZ8 388 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 LRRC15Q8TF66 581 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 TOE1Q96GM8 510 aaKnown RBP11.64□□□□□ -0.55
SNF8-207ENST00000509995 HIC2Q96JB3 615 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 MRGPRX1Q96LB2 322 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 SENP8Q96LD8 212 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 SLC6A17Q9H1V8 727 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 HCN2Q9UL51 889 aa11.64□□□□□ -0.55
SNF8-207ENST00000509995 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
SNF8-207ENST00000509995 TBC1D3BA6NDS4 549 aa11.63□□□□□ -0.55
SNF8-207ENST00000509995 LEFTY2O00292 366 aa11.63□□□□□ -0.55
SNF8-207ENST00000509995 ENC1O14682 589 aa11.63□□□□□ -0.55
SNF8-207ENST00000509995 PPEF2O14830 753 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms