RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 CYP26C1Q6V0L0 522 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 DENND5BQ6ZUT9 1274 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 IRF2BP2Q7Z5L9 587 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 VPS36Q86VN1 386 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 TTC30AQ86WT1 665 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 PASD1Q8IV76 773 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 NUP93Q8N1F7 819 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 SPC24Q8NBT2 197 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CMASQ8NFW8 434 aaPredicted RBP15.68■□□□□ 0.1
RNF4-213ENST00000509388 GPR152Q8TDT2 470 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 SECISBP2LQ93073 1101 aaKnown RBP15.68■□□□□ 0.1
RNF4-213ENST00000509388 SPATA17Q96L03 361 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 AGPAT1Q99943 283 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 UBXN6Q9BZV1 441 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 LRRC4Q9HBW1 653 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CSNK1G1Q9HCP0 422 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CLEC1BQ9P126 229 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 IMPACTQ9P2X3 320 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 PCDHGC3Q9UN70 934 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 MAGED2Q9UNF1 606 aaPredicted RBP15.68■□□□□ 0.1
RNF4-213ENST00000509388 COG5Q9UP83 839 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 MYO7AQ13402 2215 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 PRRC2BQ5JSZ5 2229 aaKnown RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 SLC38A8A6NNN8 435 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 XPO1O14980 1071 aaKnown RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 TBX10O75333 385 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 BEST1O76090 585 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 SERPING1P05155 500 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 SKILP12757 684 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 ATF6P18850 670 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 KCNA5P22460 613 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 SNX16P57768 344 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 DLX2Q07687 328 aaPredicted RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 IFRD2Q12894 506 aaPredicted RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 TBX2Q13207 712 aaPredicted RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 COL19A1Q14993 1142 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 CLUL1Q15846 466 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 SYCE2Q6PIF2 218 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 DNAJB7Q7Z6W7 309 aaPredicted RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 PIGZQ86VD9 579 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 TMEM35BQ8NCS4 154 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 SLC20A1Q8WUM9 679 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 PSMG2Q969U7 264 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 LHX5Q9H2C1 402 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 ADAM7Q9H2U9 754 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 HAUS4Q9H6D7 363 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 UBE2ZQ9H832 354 aaPredicted RBP15.67■□□□□ 0.1
RNF4-213ENST00000509388 PNPLA8Q9NP80 782 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 ST7Q9NRC1 585 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 ABHD10Q9NUJ1 306 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 CD207Q9UJ71 328 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 CHD7Q9P2D1 2997 aa15.67■□□□□ 0.1
RNF4-213ENST00000509388 H3BQ06 376 aaPredicted RBP15.66■□□□□ 0.1
RNF4-213ENST00000509388 RTN3O95197 1032 aaPredicted RBP15.66■□□□□ 0.1
RNF4-213ENST00000509388 MMEP08473 750 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 POU2F2P09086 479 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 LTBRP36941 435 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 GOLGA8FQ08AF8 430 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 GOLGA8DPQ0D2H9 430 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 TRIM72Q6ZMU5 477 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 GPR149Q86SP6 731 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 SIX6OS1Q8N1H7 587 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 MSANTD4Q8NCY6 345 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 ZMIZ2Q8NF64 920 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 DDX1Q92499 740 aaKnown RBP15.66■□□□□ 0.1
RNF4-213ENST00000509388 RIPOR3Q96MK2 946 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 GCNAQ96QF7 691 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.66■□□□□ 0.1
RNF4-213ENST00000509388 FBXO44Q9H4M3 255 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 SYNCQ9H7C4 482 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 ASAH2Q9NR71 780 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 COMMD8Q9NX08 183 aa15.66■□□□□ 0.1
RNF4-213ENST00000509388 UXTQ9UBK9 157 aaPredicted RBP15.66■□□□□ 0.1
RNF4-213ENST00000509388 NOCTQ9UK39 431 aaKnown RBP15.66■□□□□ 0.1
RNF4-213ENST00000509388 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 LSM8O95777 96 aaKnown RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 CFHP08603 1231 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 MYL4P12829 197 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 YWHAQP27348 245 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 PRKCIP41743 596 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 GPD2P43304 727 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 ACADSBP45954 432 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 PLA2G4AP47712 749 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 RGS7P49802 495 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 SLC5A3P53794 718 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 MTMR3Q13615 1198 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 PKDCCQ504Y2 493 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 PDZD4Q76G19 769 aaPredicted RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 GRASPQ7Z6J2 395 aaPredicted RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 LEMD2Q8NC56 503 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 IPO4Q8TEX9 1081 aaKnown RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 STK32AQ8WU08 396 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 SLC35F5Q8WV83 523 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 ZNF707Q96C28 371 aaPredicted RBP15.65■□□□□ 0.1
RNF4-213ENST00000509388 HSFY1Q96LI6 401 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 DNAJC7Q99615 494 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 DEF6Q9H4E7 631 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 TMEM30AQ9NV96 361 aa15.65■□□□□ 0.1
RNF4-213ENST00000509388 TULP2O00295 520 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms