RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SPATA18Q8TC71 538 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 DDX1Q92499 740 aaKnown RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 MRPS31Q92665 395 aaKnown RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 SPATA32Q96LK8 384 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
RNF4-212ENST00000509258 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
RNF4-212ENST00000509258 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 CLDN5O00501 218 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 ATG13O75143 517 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 C4BPAP04003 597 aaKnown RBP11.65□□□□□ -0.54
RNF4-212ENST00000509258 ARSAP15289 507 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 BDNFP23560 247 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 LHX1P48742 406 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 CDH8P55286 799 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 ZXDBP98169 803 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 SURF1Q15526 300 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 MDH1BQ5I0G3 518 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 PKN3Q6P5Z2 889 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 SPATA2LQ8IUW3 424 aaPredicted RBP11.65□□□□□ -0.54
RNF4-212ENST00000509258 SCN4BQ8IWT1 228 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 FSIP1Q8NA03 581 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 GAB3Q8WWW8 586 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 PCED1BQ96HM7 432 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 LOXL4Q96JB6 756 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 MYRFLQ96LU7 910 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 FAM83CQ9BQN1 747 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 KIAA1586Q9HCI6 787 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 ABCB6Q9NP58 842 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 GKN1Q9NS71 199 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 GCNT4Q9P109 453 aa11.65□□□□□ -0.54
RNF4-212ENST00000509258 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 MAP1BP46821 2468 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 TRDMT1O14717 391 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 EXOC3O60645 756 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 RPP40O75818 363 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 RPN1P04843 607 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 PCSK1P29120 753 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 SNRPFP62306 86 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 CLDN10P78369 228 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 KRT85P78386 507 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 DPYDQ12882 1025 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 MYO1EQ12965 1108 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 ORC1Q13415 861 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 RUNX3Q13761 415 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 AASDHQ4L235 1098 aaPredicted RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 IL31Q6EBC2 164 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 SPOPLQ6IQ16 392 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 MON1AQ86VX9 555 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 C12orf50Q8NA57 414 aaPredicted RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 PARD3BQ8TEW8 1205 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 MMS19Q96T76 1030 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 B3GNT5Q9BYG0 378 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 ZNF518BQ9C0D4 1074 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 EBF3Q9H4W6 596 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 FBRSL1Q9HCM7 1045 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF4-212ENST00000509258 TDP1Q9NUW8 608 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 POLR3BQ9NW08 1133 aaPredicted RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 NXF1Q9UBU9 619 aaKnown RBP11.64□□□□□ -0.55
RNF4-212ENST00000509258 HMGXB4Q9UGU5 601 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 CDH9Q9ULB4 789 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 SLC8A2Q9UPR5 921 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 MAPK8IP1Q9UQF2 711 aa11.64□□□□□ -0.55
RNF4-212ENST00000509258 GDF9O60383 454 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 TACC1O75410 805 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 AKAP3O75969 853 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 NR3C1P04150 777 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 CCDC192P0DO97 292 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 MAGEA11P43364 429 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 SYKP43405 635 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 PDE6CP51160 858 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 LIMK1P53667 647 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 CYP27A1Q02318 531 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 ZNF268Q14587 947 aaPredicted RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 ZNF77Q15935 545 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 WDR72Q3MJ13 1102 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 FSTL4Q6MZW2 842 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 SCARA5Q6ZMJ2 495 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 PAQR9Q6ZVX9 377 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 SMYD4Q8IYR2 804 aaPredicted RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 CAMKK1Q8N5S9 505 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 ARL14EPQ8N8R7 260 aaPredicted RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 OR6B3Q8NGW1 331 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 CCDC26Q8TAB7 109 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
RNF4-212ENST00000509258 EZH1Q92800 747 aaPredicted RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 TRMT2BQ96GJ1 504 aaKnown RBP11.63□□□□□ -0.55
RNF4-212ENST00000509258 FUBP3Q96I24 572 aaKnown RBP eCLIP11.63□□□□□ -0.55
RNF4-212ENST00000509258 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms