RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FMO5P49326 533 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 NLRP12P59046 1061 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FKBP3Q00688 224 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 MYL7Q01449 175 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PLD1Q13393 1074 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PTPN21Q16825 1174 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 DDR2Q16832 855 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PABPC1LQ4VXU2 614 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 HSP90AA4PQ58FG1 418 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 MIIPQ5JXC2 388 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 GJB7Q6PEY0 223 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PARM1Q6UWI2 310 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 APTXQ7Z2E3 356 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 USP37Q86T82 979 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM35AQ86V20 835 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FUKQ8N0W3 1084 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 TMEM86AQ8N2M4 240 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 TDRD5Q8NAT2 981 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 SPATA18Q8TC71 538 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM200AQ8TCP9 573 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 GIPC2Q8TF65 315 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FGF13Q92913 245 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 SYAP1Q96A49 352 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF775Q96BV0 537 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ASIC4Q96FT7 647 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 RIPOR3Q96MK2 946 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 KREMEN1Q96MU8 473 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 NECTIN4Q96NY8 510 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 GBP4Q96PP9 640 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 SEPT5Q99719 369 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ACBD6Q9BR61 282 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 PLA2G2FQ9BZM2 168 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 SIX2Q9NPC8 291 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 IGSF5Q9NSI5 407 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 RAPGEFL1Q9UHV5 662 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 RWDD2AQ9UIY3 292 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 DSEQ9UL01 958 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 FRMD4BQ9Y2L6 1034 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 HELZP42694 1942 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 USP34Q70CQ2 3546 aa7.69□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF638Q14966 1978 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 A0A1W2PRU2 124 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SOWAHDA6NJG2 315 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 HHLA1C9JL84 531 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 PI4K2BG5E9Z4 385 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 PRRG1O14668 218 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 IKBKBO14920 756 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 KIF20AO95235 890 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 PAX3P23760 479 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 FSHRP23945 695 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 GTF2H1P32780 548 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 NDST1P52848 882 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 AP3M2P53677 418 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 BMS1Q14692 1282 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 TEAD2Q15562 447 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 MGAT5BQ3V5L5 792 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CFAP221Q4G0U5 840 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF667Q5HYK9 610 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 ATAT1Q5SQI0 421 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CDKAL1Q5VV42 579 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CWF19L1Q69YN2 538 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 KRT39Q6A163 491 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CES5AQ6NT32 575 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 DPH6Q7L8W6 267 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 FRMD5Q7Z6J6 570 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 FILIP1Q7Z7B0 1213 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 C12orf29Q8N999 325 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 B3GALNT2Q8NCR0 500 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 MYCBPAPQ8TBZ2 947 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 ADAM32Q8TC27 787 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SPPL2BQ8TCT7 592 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 PSMG2Q969U7 264 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CHFRQ96EP1 664 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC22A12Q96S37 553 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 MMS19Q96T76 1030 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 TSG101Q99816 390 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SMOQ99835 787 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 KXD1Q9BQD3 176 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CORO1BQ9BR76 489 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SRRTQ9BXP5 876 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SMG9Q9H0W8 520 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SAMSN1Q9NSI8 373 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM49BQ9NUQ9 324 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 ARMCX3Q9UH62 379 aaPredicted RBP7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CDH9Q9ULB4 789 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 CDH7Q9ULB5 785 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 NUMBLQ9Y6R0 609 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 ZDBF2Q9HCK1 2354 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 TICRRQ7Z2Z1 1910 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 MUC6Q6W4X9 2439 aa7.68□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC38A8A6NNN8 435 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 F8VP50 259 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TULP2O00295 520 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 ARNTLO00327 626 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 TNFRSF10BO14763 440 aa7.67□□□□□ -1.18
TOPBP1-207ENST00000509162 DCXO43602 365 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms