RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SHTN1A0MZ66 631 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 DCLK1O15075 740 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 TLR5O60602 858 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 DNAJB5O75953 348 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 VCAM1P19320 739 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 PLCD1P51178 756 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 EVA1CP58658 441 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 MCL1Q07820 350 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 NOGQ13253 232 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 MLC1Q15049 377 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 UAP1L1Q3KQV9 507 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 TREML2Q5T2D2 321 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 SYCP2LQ5T4T6 812 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 L1TD1Q5T7N2 865 aaKnown RBP2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAM102BQ5T8I3 360 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 ICE2Q659A1 982 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 PCGF5Q86SE9 256 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 DGKHQ86XP1 1220 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 CNGA4Q8IV77 575 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 SMAP1Q8IYB5 467 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 C3orf20Q8ND61 904 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 SVIPQ8NHG7 77 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 TTC17Q96AE7 1141 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 MTMR8Q96EF0 704 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 PPP1R10Q96QC0 940 aaKnown RBP2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 TMEM79Q9BSE2 394 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 CDH19Q9H159 772 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 MRPL46Q9H2W6 279 aaKnown RBP2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 WDCPQ9H6R7 721 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZIM2Q9NZV7 527 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 HESX1Q9UBX0 185 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 PNMA2Q9UL42 364 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 POLHQ9Y253 713 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 PCDHA3Q9Y5H8 950 aa2.91□□□□□ -1.94
DEPDC1B-204ENST00000509006 MYMKA6NI61 221 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 E5RJQ4 531 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 M0QYG6 137 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ERC2O15083 957 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 AKAP10O43572 662 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 RFPL1O75677 317 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 BCAR3O75815 825 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 TJP3O95049 919 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ARIH2O95376 493 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PIM1P11309 404 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PHKG2P15735 406 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 CCND1P24385 295 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 CASP2P42575 452 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 RAB27AP51159 221 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 HK3P52790 923 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 HOXA4Q00056 320 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 GRAMD1BQ3KR37 738 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 KRTAP27-1Q3LI81 207 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 MINDY4Q4G0A6 757 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 Q4G0T1 1027 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PCID2Q5JVF3 399 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PXDC1Q5TGL8 231 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 FAM160B1Q5W0V3 765 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 SFRP4Q6FHJ7 346 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PPP1R3BQ86XI6 285 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PRR18Q8N4B5 295 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ENAHQ8N8S7 591 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 NRACQ8N912 160 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZBTB8BQ8NAP8 495 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 TTC8Q8TAM2 541 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 DDX17Q92841 729 aaKnown RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 RITA1Q96K30 269 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ASB2Q96Q27 587 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 THAP7Q9BT49 309 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ASPSCR1Q9BZE9 553 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 SLC13A1Q9BZW2 595 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 CCDC8Q9H0W5 538 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZHX3Q9H4I2 956 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 SLAMF7Q9NQ25 335 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 PDGFCQ9NRA1 345 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ZNF180Q9UJW8 692 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 ADAMTS5Q9UNA0 930 aa2.9□□□□□ -1.95
DEPDC1B-204ENST00000509006 FER1L4A9Z1Z3 1794 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 H7C1Q1 480 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 QSOX1O00391 747 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SOCS2O14508 198 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SLC16A6O15403 523 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SNUPNO95149 360 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 FESP07332 822 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 MYL3P08590 195 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 ENGP17813 658 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 SMARCA1P28370 1054 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 PPIFP30405 207 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRAPPC10P48553 1259 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 PPM1FP49593 454 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 LOXL3P58215 753 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 LMOD3Q0VAK6 560 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRIP6Q15654 476 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 MAPRE1Q15691 268 aaKnown RBP2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 EMC10Q5UCC4 262 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TTLL5Q6EMB2 1281 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 CCDC70Q6NSX1 233 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 NAPRTQ6XQN6 538 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 TRIM72Q6ZMU5 477 aa2.89□□□□□ -1.95
DEPDC1B-204ENST00000509006 KRBA2Q6ZNG9 492 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms