RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DPEP3Q9H4B8 488 aa13.88□□□□□ -0.19
HMGCS1-205ENST00000508319 GMEB2Q9UKD1 530 aa13.88□□□□□ -0.19
HMGCS1-205ENST00000508319 EML5Q05BV3 1969 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 LRRIQ3A6PVS8 624 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 F8VP50 259 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 TRIM66O15016 1216 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 HRO43593 1189 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 EGFP01133 1207 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 FAM163BP0C2L3 166 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 TCF3P15923 654 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ANXA13P27216 316 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 HOXA6P31267 233 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ATICP31939 592 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 GJA4P35212 333 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 CLDN10P78369 228 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ZXDBP98169 803 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 TRPC3Q13507 836 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 KCNB1Q14721 858 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 EML3Q32P44 896 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 HEATR6Q6AI08 1181 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 PRR23BQ6ZRT6 265 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 GPR161Q8N6U8 529 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 B3GALNT2Q8NCR0 500 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 SH3RF2Q8TEC5 729 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 PARD3BQ8TEW8 1205 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 SYAP1Q96A49 352 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 C8orf48Q96LL4 319 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ECT2Q9H8V3 914 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 VRTNQ9H8Y1 702 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 PARD6AQ9NPB6 346 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 DMAC2Q9NW81 257 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 HPSEQ9Y251 543 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 WNT6Q9Y6F9 365 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
HMGCS1-205ENST00000508319 A0A1B0GVL5 298 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 A8MXQ7 604 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 RNF40O75150 1001 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 PTPN1P18031 435 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 CMA1P23946 247 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 CNR2P34972 360 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 GRSF1Q12849 480 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 PUM1Q14671 1186 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 RSPO4Q2I0M5 234 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 KMT5BQ4FZB7 885 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 SLC9A9Q8IVB4 645 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 TTC16Q8NEE8 873 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 ATP2A3Q93084 1043 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 ELOVL4Q9GZR5 314 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 SMYD3Q9H7B4 428 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 DUS2Q9NX74 493 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 TRPM5Q9NZQ8 1165 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 RAB23Q9ULC3 237 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 RALGAPA1Q6GYQ0 2036 aa13.86□□□□□ -0.19
HMGCS1-205ENST00000508319 ZNF840PA6NDX5 716 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 VNN1O95497 513 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 OLFM2O95897 454 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 C4BPAP04003 597 aaKnown RBP13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 PFKLP17858 780 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 HDCP19113 662 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 RAP1GAPP47736 663 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 IFNAR2P48551 515 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 PDE6CP51160 858 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 GALK1P51570 392 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 AMPD2Q01433 879 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 LMNB2Q03252 620 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 SPEM2Q0P670 501 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 BIRC3Q13489 604 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 NCOA4Q13772 614 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 SIM2Q14190 667 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 ZNF699Q32M78 642 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 SCARA5Q6ZMJ2 495 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 DGLUCYQ7Z3D6 616 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 WDR5BQ86VZ2 330 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 ELMO3Q96BJ8 720 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 P2RY13Q9BPV8 354 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 B3GNT5Q9BYG0 378 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 EHD2Q9NZN4 543 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 USP18Q9UMW8 372 aa13.85□□□□□ -0.19
HMGCS1-205ENST00000508319 MED19A0JLT2 244 aaPredicted RBP13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 LEFTY2O00292 366 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 CLDN5O00501 218 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 PDXKO00764 312 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 LRP3O75074 770 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 PHACTR2O75167 634 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 OAS1P00973 400 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms