RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ROPN1BQ9BZX4 212 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 CCDC134Q9H6E4 229 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ROPN1Q9HAT0 212 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 VTA1Q9NP79 307 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 KLK14Q9P0G3 267 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 USP18Q9UMW8 372 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 GHRP10912 638 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 BRAFP15056 766 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ZNF200P98182 395 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 MYO1EQ12965 1108 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 PPP1R2P3Q6NXS1 205 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 PMF1Q6P1K2 205 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 FAM183BPQ6ZVS7 135 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 RFX6Q8HWS3 928 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 FAM71DQ8N9W8 422 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 DYDC1Q8WWB3 177 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 SERPINB12Q96P63 405 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 NCAPGQ9BPX3 1015 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ASB7Q9H672 318 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ABCF3Q9NUQ8 709 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 SPAG7O75391 227 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 DNAJC8O75937 253 aaPredicted RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 TFE3P19532 575 aaPredicted RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 GCAP28676 217 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 CAV1Q03135 178 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 TNFAIP2Q03169 654 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 ACVR2BQ13705 512 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 SCYL2Q6P3W7 929 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 SLC35B2Q8TB61 432 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 DPEP3Q9H4B8 488 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 NXF3Q9H4D5 531 aaKnown RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 DDX56Q9NY93 547 aaKnown RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 BARX2Q9UMQ3 279 aaPredicted RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 SLC12A4Q9UP95 1085 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 TAP1Q03518 808 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 PDIA2Q13087 525 aaKnown RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 CCDC142Q17RM4 750 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 FNBP1LQ5T0N5 605 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 RNASEH2BQ5TBB1 312 aaKnown RBP15.2■□□□□ 0.02
DDX41-208ENST00000507955 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 SESTD1Q86VW0 696 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 MIS12Q9H081 205 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 VPS37BQ9H9H4 285 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX41-208ENST00000507955 CITO14578 2027 aa15.2■□□□□ 0.02
DDX41-208ENST00000507955 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 HGSO14964 777 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 TRUB2O95900 331 aaKnown RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 PDGFRAP16234 1089 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■■ 32.7
DDX41-208ENST00000507955 ZKSCAN8Q15776 578 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 SNCBQ16143 134 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 GOLGA7BQ2TAP0 167 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 CCDC91Q7Z6B0 441 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 TTC30AQ86WT1 665 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 C7orf31Q8N865 590 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 TINF2Q9BSI4 451 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 GOLGA2P5Q9HBQ8 144 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 TCP11X1B4DZS4 312 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 GABBR2O75899 941 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 PDGFRBP09619 1106 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 IGFBP6P24592 240 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 SSTR1P30872 391 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 ATXN1P54253 815 aaKnown RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 ELF3P78545 371 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 RBP5P82980 135 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 ZNF268Q14587 947 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 ITIH4Q14624 930 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 HADHQ16836 314 aaKnown RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 DUSP28Q4G0W2 176 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 CYP4V2Q6ZWL3 525 aaPredicted RBP15.19■□□□□ 0.02
DDX41-208ENST00000507955 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 TMEM40Q8WWA1 233 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 P3H4Q92791 437 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 FGFR1OP2Q9NVK5 253 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 CPA4Q9UI42 421 aa15.19■□□□□ 0.02
DDX41-208ENST00000507955 EXOC1LA0A1B0GW35 172 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 RNF8O76064 485 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 ITGAVP06756 1048 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 VDRP11473 427 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 RPL22P35268 128 aaKnown RBP15.18■□□□□ 0.02
DDX41-208ENST00000507955 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
DDX41-208ENST00000507955 CDH6P55285 790 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 COPS2P61201 443 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 LMNB2Q03252 620 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 DRICH1Q6PGQ1 229 aaPredicted RBP15.18■□□□□ 0.02
DDX41-208ENST00000507955 C1orf228Q6PIY5 440 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 POLNQ7Z5Q5 900 aa15.18■□□□□ 0.02
DDX41-208ENST00000507955 IFNLR1Q8IU57 520 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms