RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MDH1BQ5I0G3 518 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 TDRD10Q5VZ19 366 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 DDX42Q86XP3 938 aaKnown RBP eCLIP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 KIAA2013Q8IYS2 634 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 B3GALNT2Q8NCR0 500 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 OVCA2Q8WZ82 227 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 MRPL45Q9BRJ2 306 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 XYLT2Q9H1B5 865 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 EBF3Q9H4W6 596 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 HPS4Q9NQG7 708 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 COMMD8Q9NX08 183 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 DUS2Q9NX74 493 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 GCNT4Q9P109 453 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 NXF1Q9UBU9 619 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 CCL26Q9Y258 94 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 USP34Q70CQ2 3546 aa15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 KIF26AQ9ULI4 1882 aaPredicted RBP15.37■□□□□ 0.05
HMGCS1-203ENST00000507004 A0A1W2PQ27 194 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 A0A1W2PQ64 194 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 A0A1W2PQD8 194 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 CHURC1-FNTBB4DL54 471 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 RPL13P26373 211 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 CASP1P29466 404 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 CDR1P51861 262 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 MYL6P60660 151 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 NCOA4Q13772 614 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 PKP1Q13835 747 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 GAS6Q14393 721 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 NFIL3Q16649 462 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 CAMKK1Q8N5S9 505 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 STKLD1Q8NE28 680 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 FAM84AQ96KN4 292 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 P2RY13Q9BPV8 354 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 TRAF3IP3Q9Y228 551 aa15.36■□□□□ 0.05
HMGCS1-203ENST00000507004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 A0A1B0GVL5 298 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 F8VP50 259 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 K7ESF4 209 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 RHOBTB3O94955 611 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 CLSTN1O94985 981 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 C4BPAP04003 597 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 NR3C1P04150 777 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 RETP07949 1114 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SLC7A9P82251 487 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SIM2Q14190 667 aaPredicted RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 ZACNQ401N2 412 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SCARA3Q6AZY7 606 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 INTS8Q75QN2 995 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 WDR5BQ86VZ2 330 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 UNC93AQ86WB7 457 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 NUP93Q8N1F7 819 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 ARL14EPQ8N8R7 260 aaPredicted RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SPRYD3Q8NCJ5 442 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 TTC8Q8TAM2 541 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SH3RF2Q8TEC5 729 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF516Q92618 1163 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 ACDQ96AP0 544 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 IMPG2Q9BZV3 1241 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 SLC8A2Q9UPR5 921 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 GPR179Q6PRD1 2367 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 OBSL1O75147 1896 aa15.35■□□□□ 0.05
HMGCS1-203ENST00000507004 ZNF840PA6NDX5 716 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 LRRIQ3A6PVS8 624 aaPredicted RBP15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 HCRTO43612 131 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 AKAP3O75969 853 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 OLFM2O95897 454 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 YWHAQP27348 245 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 GJA4P35212 333 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 Q6ZS52 159 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 GRAMD1CQ8IYS0 662 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 CCDC150Q8NCX0 1101 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 CD101Q93033 1021 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 SMARCD1Q96GM5 515 aa15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 DMAP1Q9NPF5 467 aaPredicted RBP15.34■□□□□ 0.05
HMGCS1-203ENST00000507004 KRT13P13646 458 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 FNTBP49356 437 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 TUBP50607 506 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 CCDC142Q17RM4 750 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 EML3Q32P44 896 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 CEP135Q66GS9 1140 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 TRIM68Q6AZZ1 485 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 FSTL4Q6MZW2 842 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 PRR23BQ6ZRT6 265 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 GUF1Q8N442 669 aaKnown RBP15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 DCLK2Q8N568 766 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 OTUB2Q96DC9 234 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 FAXDC2Q96IV6 333 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 DLL3Q9NYJ7 618 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 TBC1D14Q9P2M4 693 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 MYO15AQ9UKN7 3530 aa15.33■□□□□ 0.04
HMGCS1-203ENST00000507004 PTPRDP23468 1912 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms