RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 COMMD8Q9NX08 183 aa12.9□□□□□ -0.34
TTC39B-205ENST00000506891 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
TTC39B-205ENST00000506891 F5P12259 2224 aa12.9□□□□□ -0.34
TTC39B-205ENST00000506891 HCRTO43612 131 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 HLA-DRAP01903 254 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 USP17L7P0C7H9 530 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 SP9P0CG40 484 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 KPNA1P52294 538 aaPredicted RBP12.89□□□□□ -0.35
TTC39B-205ENST00000506891 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
TTC39B-205ENST00000506891 PPP3CAQ08209 521 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 CETN1Q12798 172 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 SDHAF4Q5VUM1 108 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 TXNDC8Q6A555 127 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
TTC39B-205ENST00000506891 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
TTC39B-205ENST00000506891 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 LMAN1LQ9HAT1 526 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 GKN1Q9NS71 199 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 SPATA6Q9NWH7 488 aaPredicted RBP12.89□□□□□ -0.35
TTC39B-205ENST00000506891 TRPM5Q9NZQ8 1165 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 PTPRDP23468 1912 aa12.89□□□□□ -0.35
TTC39B-205ENST00000506891 NCANO14594 1321 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 TRAV19A0A0A6YYK7 116 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 GFRA3O60609 400 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 LRRN2O75325 713 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 TCF3P15923 654 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 HDCP19113 662 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 ASPAP45381 313 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 GCLMP48507 274 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 CDH8P55286 799 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 PAK1Q13153 545 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 DGKKQ5KSL6 1271 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 CC2D1AQ6P1N0 951 aaPredicted RBP12.88□□□□□ -0.35
TTC39B-205ENST00000506891 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
TTC39B-205ENST00000506891 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
TTC39B-205ENST00000506891 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
TTC39B-205ENST00000506891 CHRDQ9H2X0 955 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 NME7Q9Y5B8 376 aa12.88□□□□□ -0.35
TTC39B-205ENST00000506891 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 F8VP50 259 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 RTN3O95197 1032 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 CHRNB1P11230 501 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 BMP6P22004 513 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 RUNX3Q13761 415 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 LRRC32Q14392 662 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 MAML2Q8IZL2 1156 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 NELFBQ8WX92 580 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 CLSTN2Q9H4D0 955 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 NDRG2Q9UN36 371 aaKnown RBP12.87□□□□□ -0.35
TTC39B-205ENST00000506891 DENND4CQ5VZ89 1909 aa12.87□□□□□ -0.35
TTC39B-205ENST00000506891 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 SPECC1L-ADORA2AF8WAN1 911 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 TADA3O75528 432 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 CTHP32929 405 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
TTC39B-205ENST00000506891 NRLP54845 237 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 NELL1Q92832 810 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 JAKMIP2Q96AA8 810 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 SLITRK1Q96PX8 696 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 CYP2S1Q96SQ9 504 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
TTC39B-205ENST00000506891 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
TTC39B-205ENST00000506891 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms