RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CSH1P0DML2 217 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 CSH2P0DML3 217 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 HMGA1P17096 107 aaKnown RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 PTPN2P17706 415 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 BCAT1P54687 386 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 EPHA5P54756 1037 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 MAP3K7CLP57077 242 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 BST2Q10589 180 aaKnown RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 CLUL1Q15846 466 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 CES5AQ6NT32 575 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 IRF2BP2Q7Z5L9 587 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 GPR152Q8TDT2 470 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 EPS8L1Q8TE68 723 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 MYRFLQ96LU7 910 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 AVENQ9NQS1 362 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 HCFC1R1Q9NWW0 138 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 HESX1Q9UBX0 185 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
TCOF1-210ENST00000506767 SPTBN5Q9NRC6 3674 aaKnown RBP13.59□□□□□ -0.23
TCOF1-210ENST00000506767 XPO1O14980 1071 aaKnown RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 FERP16591 822 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ANXA13P27216 316 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 CASP14P31944 242 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 MTHFRP42898 656 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 GPD2P43304 727 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 PDE6CP51160 858 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ZBED6P86452 979 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 PDE4CQ08493 712 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 TBX2Q13207 712 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 MTMR3Q13615 1198 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 TRIM14Q14142 442 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ARID5BQ14865 1188 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 VEPH1Q14D04 833 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 GRASPQ7Z6J2 395 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF677Q86XU0 584 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 TMC8Q8IU68 726 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 UBA3Q8TBC4 463 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 RIPOR3Q96MK2 946 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 LHX5Q9H2C1 402 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 PIDD1Q9HB75 910 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 WDR6Q9NNW5 1121 aaKnown RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 NOCTQ9UK39 431 aaKnown RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-210ENST00000506767 DENND4AQ7Z401 1863 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 MYH10P35580 1976 aa13.58□□□□□ -0.24
TCOF1-210ENST00000506767 FAM92AA1XBS5 289 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 M0QYV0 167 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 TULP2O00295 520 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 RHOP08100 348 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 SETSIPP0DME0 302 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 CHRNB2P17787 502 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 SSTR3P32745 418 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 PRKCIP41743 596 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 RPL34P49207 117 aaKnown RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 USP46P62068 366 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 NTHL1P78549 312 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 TFF2Q03403 129 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 RAB41Q5JT25 222 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 PRSS36Q5K4E3 855 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 E4F1Q66K89 784 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 DENND1BQ6P3S1 775 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 PIGZQ86VD9 579 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 CPLX3Q8WVH0 158 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 KCTD13Q8WZ19 329 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 SYN2Q92777 582 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 NECTIN4Q96NY8 510 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF334Q9HCZ1 680 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 THEGQ9P2T0 379 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
TCOF1-210ENST00000506767 VCANP13611 3396 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 DOCK6Q96HP0 2047 aa13.57□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 MOSPD3O75425 235 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 GABBR2O75899 941 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms