RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TNK2Q07912 1038 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 USP4Q13107 963 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 SGSM1Q2NKQ1 1148 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 EDRF1Q3B7T1 1238 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF667Q5HYK9 610 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 DENND5BQ6ZUT9 1274 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 INTS8Q75QN2 995 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 TAF4BQ92750 862 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ELMO3Q96BJ8 720 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 SLC22A12Q96S37 553 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 B3GNT5Q9BYG0 378 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 HPS4Q9NQG7 708 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 SPATA6Q9NWH7 488 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 GTSE1Q9NYZ3 720 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 MAPK8IP1Q9UQF2 711 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 FRMD4BQ9Y2L6 1034 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 R4GN57 208 aa9.67□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF292O60281 2723 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 C2orf78A6NCI8 922 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 F8VP50 259 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 HLA-DRAP01903 254 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 USP17L7P0C7H9 530 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 PFKLP17858 780 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 RPL13P26373 211 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 GRIK1P39086 918 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 ASPAP45381 313 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 RAP1GAPP47736 663 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 KPNA1P52294 538 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM160A1Q05DH4 1040 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 PPP3CAQ08209 521 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 MTAPQ13126 283 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 ADAM9Q13443 819 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 PNOCQ13519 176 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 CCINQ13939 588 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 GAS6Q14393 721 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 ZNF77Q15935 545 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 PAQR9Q6ZVX9 377 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM186BQ8IYM0 893 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 SMYD4Q8IYR2 804 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 CRYBG2Q8N1P7 616 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 ZBTB44Q8NCP5 570 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 CHFRQ96EP1 664 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 GSDMAQ96QA5 445 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 CYP2S1Q96SQ9 504 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 LMAN1LQ9HAT1 526 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 GKN1Q9NS71 199 aa9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 THG1LQ9NWX6 298 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 HELZP42694 1942 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-209ENST00000506632 SPTBN4Q9H254 2564 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TRAV19A0A0A6YYK7 116 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 OTOL1A6NHN0 477 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 CLDN5O00501 218 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 LILRB5O75023 590 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 PAPSS2O95340 614 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 OLFM2O95897 454 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TRIM49P0CI25 452 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TRIM49CP0CI26 452 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 P4HA1P13674 534 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ANXA13P27216 316 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 PSMC2P35998 433 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 PPP3CCP48454 512 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 CSTF1Q05048 431 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 RUNX3Q13761 415 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ITPRIPL2Q3MIP1 535 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 DGKKQ5KSL6 1271 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 SPOPLQ6IQ16 392 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 SCARA5Q6ZMJ2 495 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM35AQ86V20 835 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 UNC93AQ86WB7 457 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ZC3H3Q8IXZ2 948 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ELOA2Q8IYF1 753 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 FUKQ8N0W3 1084 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ARL14EPQ8N8R7 260 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TTC8Q8TAM2 541 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TAS1R2Q8TE23 839 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TNIP3Q96KP6 325 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TIGD1Q96MW7 591 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 IL37Q9NZH6 218 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 EHD2Q9NZN4 543 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 TRPM5Q9NZQ8 1165 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 HMGXB4Q9UGU5 601 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 ARHGAP26Q9UNA1 814 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 PCDHGA2Q9Y5H1 932 aa9.65□□□□□ -0.86
PDLIM5-209ENST00000506632 FAM92AA1XBS5 289 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 ZNF840PA6NDX5 716 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 GOLGA6L4A6NEF3 574 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TRDMT1O14717 391 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 OAS1P00973 400 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-209ENST00000506632 LMNAP02545 664 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms