RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 TDRPQ86YL5 185 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 DEPDC4Q8N2C3 294 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 FAM133AQ8N9E0 248 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ENGASEQ8NFI3 743 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF518BQ9C0D4 1074 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ARHGEF3Q9NR81 526 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 PAK5Q9P286 719 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SNX9Q9Y5X1 595 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 EPN2O95208 641 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ASLP04424 464 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF18P17022 549 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ADSSP30520 456 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 OASLQ15646 514 aaKnown RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ARL13BQ3SXY8 428 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 TRIM65Q6PJ69 517 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 IFNL2Q8IZJ0 200 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 ASNSD1Q9NWL6 643 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 A0A0D9SFI3 127 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 GAS7O60861 476 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 NCF2P19878 526 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 AP2S1P53680 142 aaPredicted RBP6.3□□□□□ -1.4
LINC02397-201ENST00000504409 CCDC142Q17RM4 750 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 HSD17B12Q53GQ0 312 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 SENP7Q9BQF6 1050 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 C3orf18Q9UK00 162 aa6.3□□□□□ -1.4
LINC02397-201ENST00000504409 FMN2Q9NZ56 1722 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GPAA1O43292 621 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 STRIP1Q5VSL9 837 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ILKAPQ9H0C8 392 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 C10orf71Q711Q0 1435 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TBX3O15119 743 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GCNT3O95395 438 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MOCS3O95396 460 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ECDO95905 644 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SOX5P35711 763 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 DEPDC1Q5TB30 811 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 P3H2Q8IVL5 708 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 GJD3Q8N144 294 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 FAM84AQ96KN4 292 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 NACC1Q96RE7 527 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MYD88Q99836 296 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SLC39A1Q9NY26 324 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ADAM28Q9UKQ2 775 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 EFCAB10A6NFE3 127 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TMEM44Q2T9K0 475 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 THNSL1Q8IYQ7 743 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 OXNAD1Q96HP4 312 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 APOPT1Q96IL0 206 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 C12orf66Q96MD2 445 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 COG4Q9H9E3 785 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PPME1Q9Y570 386 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 DNAJC6O75061 913 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TULP3O75386 442 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SPRP35270 261 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TIE1P35590 1138 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ETV1P50549 477 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 THOP1P52888 689 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TMBIM6P55061 237 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 RBM15BQ8NDT2 890 aaKnown RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 JDP2Q8WYK2 163 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ERMAPQ96PL5 475 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PLEKHF1Q96S99 279 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 LRRC1Q9BTT6 524 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SP140LQ9H930 580 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 TMEM45AQ9NWC5 275 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF532Q9HCE3 1301 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 POC1B-GALNT4F8VUJ3 575 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 NBNO60934 754 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ATP1A1P05023 1023 aaKnown RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 CRKP46108 304 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ALDH5A1P51649 535 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 RHPN2Q8IUC4 686 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PROCA1Q8NCQ7 364 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 RP9Q8TA86 221 aaKnown RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ACAT2Q9BWD1 397 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ZDHHC9Q9Y397 364 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 AFG3L2Q9Y4W6 797 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ADGRF5Q8IZF2 1346 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SHPRHQ149N8 1683 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 AKAP8O43823 692 aaKnown RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 MPOP05164 745 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 CCNHP51946 323 aaPredicted RBP6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF45Q02386 682 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SCN1BQ07699 218 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PDK3Q15120 406 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 PDZK1Q5T2W1 519 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 ELMSAN1Q6PJG2 1045 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 JAMLQ86YT9 394 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 FAM212AQ96EL1 285 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 SLC25A23Q9BV35 468 aa6.29□□□□□ -1.4
LINC02397-201ENST00000504409 NOL11Q9H8H0 719 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms