RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 RTN3O95197 1032 aaPredicted RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 CPA3P15088 417 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 CNGA1P29973 690 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 MATR3P43243 847 aaKnown RBP eCLIP6.7□□□□□ -1.342e-10■■■□□ 15.4
COPB2-204ENST00000504295 MFAP3P55082 362 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 HUNKP57058 714 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 MRPS35P82673 323 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 SEMA3BQ13214 749 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 CUL2Q13617 745 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 PTK2BQ14289 1009 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 TBC1D25Q3MII6 688 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 XKR4Q5GH76 650 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 RGMBQ6NW40 437 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 SLC30A10Q6XR72 485 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 CEP128Q6ZU80 1094 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 XYLT1Q86Y38 959 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 PASD1Q8IV76 773 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 HMGCLL1Q8TB92 370 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 TEKT4Q8WW24 435 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 ALKBH8Q96BT7 664 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 SPAG5Q96R06 1193 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 ELAC2Q9BQ52 826 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 TEKT3Q9BXF9 490 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 DCLRE1BQ9H816 532 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 KIF9Q9HAQ2 790 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 UBE2TQ9NPD8 197 aaPredicted RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 PCMTD2Q9NV79 361 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 KCNK4Q9NYG8 393 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 EXOC7Q9UPT5 735 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.7□□□□□ -1.34
COPB2-204ENST00000504295 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 TM7SF2O76062 418 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 EGFRP00533 1210 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 RALAP11233 206 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 FGF3P11487 239 aaPredicted RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 TPSB2P20231 275 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 QARSP47897 775 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 KCNJ1P48048 391 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 ROR2Q01974 943 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 TAP1Q03518 808 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 GALNT2Q10471 571 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 NOGQ13253 232 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 KCTD11Q693B1 232 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 LLGL2Q6P1M3 1020 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 VPS36Q86VN1 386 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 ADGRF2Q8IZF7 708 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 DRAXINQ8NBI3 349 aaPredicted RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 SLC10A4Q96EP9 437 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 SIGLEC10Q96LC7 697 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 TOPORSQ9NS56 1045 aaPredicted RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 SIX4Q9UIU6 781 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 LRCH1Q9Y2L9 728 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 NEUROG3Q9Y4Z2 214 aa6.7□□□□□ -1.34
COPB2-204ENST00000504295 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.7□□□□□ -1.34
COPB2-204ENST00000504295 DLGAP1O14490 977 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 VILLO15195 856 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 WDR46O15213 610 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 B4GALT4O60513 344 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 LMNAP02545 664 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 ALDH2P05091 517 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 HPDP32754 393 aaPredicted RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 SP2Q02086 613 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 TRAF1Q13077 416 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ZKSCAN8Q15776 578 aaPredicted RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 ABCB5Q2M3G0 1257 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 NBPF20Q3BBV1 942 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 NUGGCQ68CJ6 796 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ALKAL1Q6UXT8 129 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 MARK2Q7KZI7 788 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 BRSK2Q8IWQ3 736 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 CDAN1Q8IWY9 1227 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 RHOT1Q8IXI2 618 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 GPD1LQ8N335 351 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 PLD5Q8N7P1 536 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 STKLD1Q8NE28 680 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 TTC8Q8TAM2 541 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 UHMK1Q8TAS1 419 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 ARNTL2Q8WYA1 636 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ATG4AQ8WYN0 398 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 KIFAP3Q92845 792 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 PDCD2LQ9BRP1 358 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 SLCO1B3Q9NPD5 702 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 PSMC3IPQ9P2W1 217 aaPredicted RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 RIMS3Q9UJD0 308 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 GOLGB1Q14789 3259 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 CA12O43570 354 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 TJP3O95049 919 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ERBB2P04626 1255 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 HSPA1AP0DMV8 641 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 HSPA1BP0DMV9 641 aaKnown RBP6.69□□□□□ -1.34
COPB2-204ENST00000504295 MXI1P50539 228 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 INHBCP55103 352 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 SREBF2Q12772 1141 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 EFTUD2Q15029 972 aaKnown RBP eCLIP6.69□□□□□ -1.346e-7■■■□□ 16.7
COPB2-204ENST00000504295 KYNUQ16719 465 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 FBXL19Q6PCT2 694 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 ZPBP2Q6X784 338 aa6.69□□□□□ -1.34
COPB2-204ENST00000504295 FAM178BQ8IXR5 827 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms