RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 PLA2G4AP47712 749 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 CENPCQ03188 943 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 PMF1Q6P1K2 205 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 LILRA6Q6PI73 481 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 CCDC149Q6ZUS6 474 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 PHF13Q86YI8 300 aaPredicted RBP14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 TCEAL8Q8IYN2 117 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 TTC9BQ8N6N2 239 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 KREMEN2Q8NCW0 462 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 IPO4Q8TEX9 1081 aaKnown RBP14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 PPP1R13BQ96KQ4 1090 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 HSFY1Q96LI6 401 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 C8orf48Q96LL4 319 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 KCNK16Q96T55 309 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 ISCUQ9H1K1 167 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 LRRC4Q9HBW1 653 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 CYLDQ9NQC7 956 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 ST7Q9NRC1 585 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 TAS2R14Q9NYV8 317 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 ADAM22Q9P0K1 906 aa14.62□□□□□ -0.07
CYSTM1-202ENST00000504227 SEC24AO95486 1093 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CALB1P05937 261 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 SPATA31D3P0C874 917 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 DEKP35659 375 aaKnown RBP14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 MAGEA1P43355 309 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 ALDH1A3P47895 512 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 RGS7P49802 495 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CLCN4P51793 760 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CACNA2D1P54289 1103 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 PDCLQ13371 301 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 DDR2Q16832 855 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 HS1BP3Q53T59 392 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 ZNF697Q5TEC3 545 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 LIN9Q5TKA1 542 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 SPATA31D4Q6ZUB0 917 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 RBM23Q86U06 439 aaKnown RBP14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 PIGZQ86VD9 579 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 TXLNBQ8N3L3 684 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 ZMIZ2Q8NF64 920 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 KCTD13Q8WZ19 329 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 VCPIP1Q96JH7 1222 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 SPATA17Q96L03 361 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CEP295NLQ96MC4 621 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CDCA3Q99618 268 aaPredicted RBP14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 SLC4A5Q9BY07 1137 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CRISPLD1Q9H336 500 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 PRDM12Q9H4Q4 367 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 PNPLA8Q9NP80 782 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 TMEM30AQ9NV96 361 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 DPP7Q9UHL4 492 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 CYTH4Q9UIA0 394 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 NENFQ9UMX5 172 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 PCDHA13Q9Y5I0 950 aa14.61□□□□□ -0.07
CYSTM1-202ENST00000504227 MYH10P35580 1976 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 FAM170AA1A519 330 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 TULP2O00295 520 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 SOX1O00570 391 aaPredicted RBP14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 ZNF263O14978 683 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 PER2O15055 1255 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 H2AFZP0C0S5 128 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 MMP8P22894 467 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 NRIP1P48552 1158 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 PLD1Q13393 1074 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 TOGARAM2Q6ZUX3 1019 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 H2AFVQ71UI9 128 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 RTL10Q7L3V2 364 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 TMEM110Q86TL2 294 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 MCOLN2Q8IZK6 566 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 SLC22A17Q8WUG5 538 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 HDAC7Q8WUI4 952 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 C18orf8Q96DM3 657 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 CPXM1Q96SM3 734 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 TTYH1Q9H313 450 aaPredicted RBP14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 PLEKHA4Q9H4M7 779 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 FBXW11Q9UKB1 542 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
CYSTM1-202ENST00000504227 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.6□□□□□ -0.074e-8■■■□□ 15.3
CYSTM1-202ENST00000504227 ANKRD62A6NC57 917 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 HHLA1C9JL84 531 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 SOAT2O75908 522 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 FBXO21O94952 628 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 RTN3O95197 1032 aaPredicted RBP14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 CCDC175P0C221 793 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 MYBL1P10243 752 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 LCP1P13796 627 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 RPL34P49207 117 aaKnown RBP14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 GPR15P49685 360 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 TKTL1P51854 596 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 EPHB3P54753 998 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 GALCP54803 685 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 DUSP6Q16828 381 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 PTPN20Q4JDL3 420 aa14.59□□□□□ -0.07
CYSTM1-202ENST00000504227 SDHAF4Q5VUM1 108 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms