RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ADKP55263 362 aaKnown RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 KRT85P78386 507 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 ASIC2Q16515 512 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 ABCB5Q2M3G0 1257 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 TREML2Q5T2D2 321 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 THEMIS2Q5TEJ8 643 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 SYDE2Q5VT97 1194 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 EFCAB2Q5VUJ9 269 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 FAM160B1Q5W0V3 765 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 LAYNQ6UX15 382 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 PPP1R32Q7Z5V6 425 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 PIP4P1Q86T03 277 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 USP37Q86T82 979 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 PNMA8AQ86V59 439 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 NR2C2APQ86WQ0 139 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 LRRC71Q8N4P6 559 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 CPA6Q8N4T0 437 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 MPLKIPQ8TAP9 179 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 TNPO1Q92973 898 aaKnown RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 TMEM204Q9BSN7 226 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 C1orf43Q9BWL3 253 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 WDCPQ9H6R7 721 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 SERHLQ9NQF3 203 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 GJB4Q9NTQ9 266 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 MRPS18AQ9NVS2 196 aaKnown RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 CCNL1Q9UK58 526 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZDHHC8Q9ULC8 765 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 ADAMTS5Q9UNA0 930 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 AGAP1Q9UPQ3 857 aa2.64□□□□□ -1.99
HMGB3P17-201ENST00000504195 SHTN1A0MZ66 631 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 LRRC14BA6NHZ5 514 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PRSS29PA6NIE9 313 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 TNFRSF13BO14836 293 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 SLC16A6O15403 523 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 GRID2O43424 1007 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA12O60330 932 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 DTNBO60941 627 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 A1BGP04217 495 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 ENGP17813 658 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PPIFP30405 207 aaKnown RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 LIPAP38571 399 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 TOB1P50616 345 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 CLCN2P51788 898 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 DSC2Q02487 901 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 C4orf46Q504U0 113 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZNF549Q6P9A3 640 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 DDX42Q86XP3 938 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 FAM90A1Q86YD7 464 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 MIER2Q8N344 545 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 SPEM1Q8N4L4 309 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 SNX18Q96RF0 628 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 FEZ2Q9UHY8 353 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 SERPINB13Q9UIV8 391 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 SERTAD3Q9UJW9 196 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA9Q9Y5G4 932 aaKnown RBP2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA8Q9Y5G5 932 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA7Q9Y5G6 932 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA6Q9Y5G7 932 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHGA3Q9Y5H0 932 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 PCDHA3Q9Y5H8 950 aa2.63□□□□□ -1.99
HMGB3P17-201ENST00000504195 TLR2O60603 784 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 TJP3O95049 919 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 FESP07332 822 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ATXN1LP0C7T5 689 aaKnown RBP2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 PIM1P11309 404 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 PXNP49023 591 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 TPTEP56180 551 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 LOXL3P58215 753 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 SATB1Q01826 763 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ID2Q02363 134 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ITKQ08881 620 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 NOGQ13253 232 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 LONRF3Q496Y0 759 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ARHGAP40Q5TG30 622 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ANO7Q6IWH7 933 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 COLCA1Q6ZS62 124 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 HEATR3Q7Z4Q2 680 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZNF329Q86UD4 541 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 FAM46DQ8NEK8 389 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ABHD11Q8NFV4 315 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ZFYVE19Q96K21 471 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 LMLNQ96KR4 655 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 SLC46A1Q96NT5 459 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 MOGAT1Q96PD6 335 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 FYTTD1Q96QD9 318 aaKnown RBP2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 SIGLEC11Q96RL6 698 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 PTDSS2Q9BVG9 487 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 TTYH3Q9C0H2 523 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 MLXIPQ9HAP2 919 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 GLOD4Q9HC38 313 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 HESX1Q9UBX0 185 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 ABCF2Q9UG63 623 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 TRHDEQ9UKU6 1024 aa2.62□□□□□ -1.99
HMGB3P17-201ENST00000504195 A1L4Q6 167 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 TMEM232C9JQI7 657 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 ACOT8O14734 319 aa2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 CNOT3O75175 753 aaKnown RBP2.61□□□□□ -1.99
HMGB3P17-201ENST00000504195 DLDP09622 509 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms