RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SESN3P58005 492 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ADAM17P78536 824 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 MYO1EQ12965 1108 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 MFSD7Q6UXD7 560 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 KDM7AQ6ZMT4 941 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 GABPB2Q8TAK5 448 aaPredicted RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 DNAJB3Q8WWF6 145 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 CAPS2Q9BXY5 557 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 PABPC3Q9H361 631 aaKnown RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 SYNCQ9H7C4 482 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ETAA1Q9NY74 926 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 BLOC1S6Q9UL45 172 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 RALGAPA2Q2PPJ7 1873 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 PTPN7P35236 360 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 RGS2P41220 211 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 GPD2P43304 727 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 GABRB2P47870 512 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 EIF3BP55884 814 aaKnown RBP12.16□□□□□ -0.46
USP46-204ENST00000503060 COPS2P61201 443 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 AGBL2Q5U5Z8 902 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 EMC10Q5UCC4 262 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 AGAP9Q5VTM2 703 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 TXNRD3NBQ6F5E7 133 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 FNIP1Q8TF40 1166 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 CCDC114Q96M63 670 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 CENPHQ9H3R5 247 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 KIAA1257Q9ULG3 409 aa12.16□□□□□ -0.46
USP46-204ENST00000503060 NUDT17P0C025 328 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 KRT10P13645 584 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 ITIH2P19823 946 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 NR1D1P20393 614 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 IVDP26440 423 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 BEX3Q00994 111 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 PDCLQ13371 301 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 SLMAPQ14BN4 828 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 TOMM20Q15388 145 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
USP46-204ENST00000503060 LRRC31Q6UY01 552 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 MCRS1Q96EZ8 462 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 SNF8Q96H20 258 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 RMDN2Q96LZ7 410 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 FAM118BQ9BPY3 351 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 METTL5Q9NRN9 209 aaKnown RBP12.15□□□□□ -0.46
USP46-204ENST00000503060 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 Q9Y3F1 56 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 NEU2Q9Y3R4 380 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 HES2Q9Y543 173 aa12.15□□□□□ -0.46
USP46-204ENST00000503060 PPEF2O14830 753 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 TREHO43280 583 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 TJP3O95049 919 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 RARGP13631 454 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.47
USP46-204ENST00000503060 CYP3A5P20815 502 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 AXLP30530 894 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 ATP1A2P50993 1020 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 IRAK1P51617 712 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 ADCY2Q08462 1091 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 IFFO1Q0D2I5 559 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 KRT71Q3SY84 523 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 ODF2Q5BJF6 829 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 KAZNQ674X7 775 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 DENND2CQ68D51 928 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 RHBDF2Q6PJF5 856 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 IFNL1Q8IU54 200 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 BEST2Q8NFU1 509 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 UBA3Q8TBC4 463 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 RAPGEF5Q92565 580 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 APBA2Q99767 749 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.47
USP46-204ENST00000503060 TUBGCP4Q9UGJ1 667 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 GJD2Q9UKL4 321 aa12.15□□□□□ -0.47
USP46-204ENST00000503060 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 TP73O15350 636 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 RECQL4O94761 1208 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 IGHA2P01877 340 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 ATF2P15336 505 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 GNGT1P63211 74 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 ZNF200P98182 395 aaPredicted RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 TAGLNQ01995 201 aaKnown RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 SLC25A11Q02978 314 aaKnown RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 SNX17Q15036 470 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
USP46-204ENST00000503060 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
USP46-204ENST00000503060 ALKAL1Q6UXT8 129 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms